Thunnus thynnus (Atlantic bluefin tuna): 137177044
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Entry
137177044 CDS
T11154
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
137177044 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tty03400
]
137177044 (lig4)
Enzymes [BR:
tty01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
137177044 (lig4)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
137177044 (lig4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137177044
NCBI-ProteinID:
XP_067439227
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Position
24:4748889..4756522
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AA seq
910 aa
AA seq
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MEGTSKSDAAGQLSVAAQVPFLHLCITLEKIQKSKLRPDKSKILGDFIESWRKFHSALHK
DNPKTTDSFYPAMRLIVPPFERERMAYGIKENMLAKLYIDVLGLPKNGPEANKLLNYRAP
TASQGEAGDFAGMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDLVKKSLLHLI
THSSALEQKWLIRMILKDMKLGVSKETVLQVFHPDAAELYNVNTDLNKVCQQLHKTSVSL
SEVSIELFSAFKPMLAAIANIRNVEKQMGNSPFYIQTKLDGERIQLHKDGDVYKYFSRNA
FDYTQQFGGSPLEGSLTPYIHNVFKSHVVNCILDGEMMAYNPTAETFMQKGSKFDIKRLM
DDSELQTCFCVFDVLLVNGQKLGKEPLQKRYETMQTVFTPVKGRMHLVPKTDARTMQEVV
NALNDAIDNREEGIMVKDPLSIYKPDKRGEGWLKIKPEYMDGLMDELDLLIVGGYWGKGR
RGGMMSHFLCGIAEAPKPGEKPSVFHTFCRIGSGYTMKELYDLGLKLAKHWKVYRRNDPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWYQCMT
LAELDQFRSKASGKLASRHLHIDNDEPQKKKRKLAAKPKKVIGLIDHFKPQDLSGVTKET
DMFEDVEFCILNGTEDHPKAELEKGVARCGGIVVQNPGRDTYCVIAGIENMRVKNLISSN
QHDVVWAAWLLECLDQKQVVPWQPCHMIHMSPSTREHFAKEYDSYGDSYFVDTDEQQLRE
VFSRISSADTSAAVNVGQVEERYGWDDLPTSMFRPFKVYMDSYADIRDPKSALPATCLDI
RALEFRYHGGKVVQKLEEGVSHVVMAEETRLLDLRTLRRSFRKKFKIVRDSWVTDSIKAG
YLMNDNDYLV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacttccaaaagtgatgctgctggtcagctttctgttgctgctcaagttccc
ttccttcacctgtgtatcactttagagaaaatccagaagtcgaaactccgtccagataaa
tccaagatccttggtgatttcattgaatcgtggaggaagtttcattctgccctccacaaa
gataaccccaaaacgacagactctttctatccagctatgcgcctcatagttccccctttt
gaacgagagcgtatggcgtatggcatcaaagagaacatgttagctaaactctacatcgat
gtattaggtctcccaaagaatggcccagaagccaataaactgttgaactaccgagctcca
accgcatcccaaggagaagctggagactttgccggcatggcatactttgtgctgaagaaa
cggtgcaccagccagggaaacctcagcatcaaagaagtcaatgactttctggattcagtt
gccatcaacaacgctagcaaacagaaagatcttgtgaaaaagagtctgctgcatctcatc
acgcacagctcggctcttgagcaaaaatggctcatcagaatgattctgaaggacatgaag
ctaggggtcagcaaagaaactgttctccaagtcttccatcctgatgctgctgagctctac
aatgtgaacacagacttaaacaaggtgtgccagcagctccacaaaacctcagtgtctttg
agtgaagtctctattgaactcttctctgccttcaagcccatgttggcagctattgctaac
atccgcaatgtggagaaacagatgggcaatagccctttttacattcaaaccaagcttgat
ggggagcgtatacaactgcataaagatggagacgtgtacaagtactttagccgaaatgct
tttgattacacacagcagtttggaggatccccgctggagggttcactcacaccttacatc
cacaatgtttttaaaagccacgttgtgaactgcatccttgacggagagatgatggcatac
aacccaaccgccgagaccttcatgcagaaagggagcaaatttgacatcaagaggctgatg
gacgactctgagttacagacatgcttctgcgtgtttgacgtgctgttagtcaatggccaa
aagcttggcaaggaaccgctgcagaagcgttacgagacaatgcagacagttttcacccca
gttaagggaaggatgcacctggtgccaaagacagatgccagaaccatgcaggaagtggtg
aatgccctcaatgacgccatagacaacagggaggaggggatcatggtgaaggatccttta
tccatctacaaacctgacaagcggggggagggatggctgaaaataaagccggaatatatg
gatggcttgatggatgagcttgacctgctgattgttggtggctactgggggaaaggcaga
cggggtggtatgatgtcccatttcttatgtggcattgccgaagctccaaagcctggtgag
aaaccctcggttttccacacattctgccgcattggctccggctacaccatgaaggagttg
tacgaccttggcttgaagttagccaagcactggaaggtctaccgaagaaatgacccacca
gcatccatcctgtgtggaacagagaagccagaagtctacattgaaccctgcaactcagtc
atcattcaggtcaaggcggcagagatagtcggaagcgacatgtataaaaccaactgcacc
ctccgcttccccaggattgagaagatccgtgacgacaaggagtggtaccagtgcatgact
ctggcagagctggatcaatttcgcagcaaagcatcgggaaaacttgcctcacggcacctt
cacatcgacaacgacgaaccacaaaagaagaagcgcaagctggcagccaaacccaagaag
gtgattgggctcattgaccactttaagccccaggacctctctggggttaccaaggagact
gatatgttcgaggatgtggagttctgcatcctgaatgggactgaggatcaccccaaggct
gagctggaaaaaggcgtggccaggtgtgggggtatcgtggttcaaaatcctggacgggac
acctactgcgtgatcgccggaatagagaacatgcgtgtgaaaaacctgatttcgtccaac
cagcacgacgtggtgtgggccgcctggctgctggagtgccttgaccagaagcaagtggtc
ccatggcaaccctgccacatgatccacatgtcgccctccaccagggagcactttgccaag
gagtatgacagctacggagacagctactttgtggacacagatgagcagcagctgcgtgaa
gtgttcagccgcatcagcagtgctgacacatcggcagccgtgaacgttggccaggtggag
gagcgatatggctgggatgatcttcccaccagcatgttcagacccttcaaggtttacatg
gacagctacgctgacataagagaccctaaaagcgccctacctgccacctgtttggacatc
agggcactagagtttcgttaccatggaggaaaggtggtgcagaagttggaggaaggagtg
tcccatgtcgttatggcagaggaaacaagacttctagatttgaggactctgaggcgcagc
tttaggaagaagtttaagattgtaagagactcgtgggtgactgattcaatcaaagcaggg
tatctgatgaatgacaatgactacttagtttga
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