Thunnus thynnus (Atlantic bluefin tuna): 137191153
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Entry
137191153 CDS
T11154
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04270
Vascular smooth muscle contraction
tty04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
137191153 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
137191153 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137191153 (arhgef1)
Membrane trafficking [BR:
tty04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
137191153 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDV_N
RGS
SOS1_NGEF_PH
DUF2730
Motif
Other DBs
NCBI-GeneID:
137191153
NCBI-ProteinID:
XP_067457115
LinkDB
All DBs
Position
10:complement(12590330..12631310)
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AA seq
1082 aa
AA seq
DB search
MDAEDAHFGRGVFGAQCSNPAMSIIGAEDEDFENDLNDVVDDQCKHFNNIEQLKDRPTHL
LVFMQHVILQFDPAPMLCYLHADLFKNLSAKETKKQFVEFYNSFLDKGATLKVTVPPNVA
SELDRTRPDLLTDDVQRRYAQEVQSTLAAEVAKQLEDFRQKRMMGMTPNEAELNDVDSHY
PTDRIPREMKEKSVAETLLDKMSETQLTIVPDEDKCQSIFSAVVFYMKHLGVKTRAVDSK
KSRGGFFRRQLVKNKKDESTKTKPRGGFPGIPSWIGGNPEVKPKTETEADKEKVGQERKG
PAPGRGSLTDPAAPSVGSRKSGSSGGPASLPGLEVSDGSGNNINITNNPESSHTDGLSSN
RLEPPNLSDRGEVSPVGLVGGLIAGESVFPSDTPTEENLEKDRRKTSRKVARSESARVDR
HSSRRRGSTRVKQSRSRSDVDLQQPISSTTTSPAPLTPQHLHPIEGPSLVFEGPGPSPTS
PSPQLEEMDPRFQELEQDPPNWRELAPSEALSSLSKKETKRQEVINELFATEHAHVRMLS
VLQTVFSKPLERDELLTSTELAAIFPNLEEIIEMHYTFYENLKKLRLEDGFIVKSISTTV
LNRFGGHEGEWFQKLTARFCSHQSWALDQIKSRQRKEPRFNSFILEAESKPQCRRLQLKD
IIPIEMQRLTKYPLLLENIAKNTEDPTEKEDIQQSAECCRKILNHVNEEVKVMENLLTLK
DYQRRLDTSGLKPSNELYTEYKNIDLTQKKMLYEGPLTWRVTKEKAIEVQCVLLGDLLVL
LQKQDDKMVLKCQSKSNIAIQEGKQMLSPIIKLDSVFLREVATDRKAFYVIFTWDSGAQI
YELVAQSLGERKTWTEVIKSAVDDLKKSGAPMKLPLPPGVGGAPFSPTLTAPLSPTENGS
LKSSSDRDKDSLTDEKSTDPRHTLIDFLSDKGFDLIGHSNSDQEKVANNALDEVMSLKRL
LVGSISLSEDSQPDEENGEEQSERPNLDTDSCQSTEEHSQTTDRGAEEENENSCEKEGAG
TKGEEEKSISAPLVLSQERMEEVCRRLHSLEEQLKRLQTVEEEHHRLQEALSKFSLEGGN
FQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaagatgcccacttcgggcggggtgtgttcggggctcagtgctctaaccca
gccatgagcatcatcggggctgaggatgaggatttcgagaacgatctgaatgacgtggtg
gatgaccagtgtaaacacttcaacaatatagagcagttgaaggatcggcccacccacctg
ctggtcttcatgcaacatgtcattctacagtttgaccctgctccaatgctgtgttacctc
catgctgacctcttcaagaacctcagtgccaaagagaccaagaagcagtttgtggagttc
tacaacagcttcttggataagggtgctactctcaaagtgacagtaccacctaatgtagct
tctgaattggaccggactcgtccagatctgctcaccgatgacgtccaacggcgctatgcc
caggaggtccagagtacactggctgccgaagtggcgaaacagctggaagacttcaggcag
aagagaatgatgggcatgacccccaacgaggctgagctgaacgacgtggatagccactat
cccactgaccgcatccctagggagatgaaggagaagtctgtagccgagaccctgctggac
aagatgtctgagacacaacttacaattgtcccggacgaggacaaatgccaatccatcttt
tcagcggtggtcttctacatgaagcaccttggggttaaaaccagggcagttgacagtaag
aagtccagaggaggcttcttcaggagacagctggtaaagaataagaaggatgaatccaca
aagaccaagcccagggggggctttcccggcatccccagctggattggcggcaaccctgag
gtcaaacctaaaacggaaactgaagcggataaggagaaagtaggtcaggagcgtaagggt
ccagctcccggcagaggctccttgaccgaccctgcggccccttctgtcggcagcaggaag
tcaggttccagtggaggtcccgcctccctgcctgggttagaggtcagcgatggctcaggc
aacaacatcaacattaccaacaacccagagtcttcacacaccgatggcctctcaagcaat
cgcttagagcctccaaacttatcagaccggggtgaggtgtctcctgttgggctggtaggt
gggttgatcgctggggagtccgtctttcccagcgacactcccacagaggagaatctggag
aaagacagacggaagacaagtaggaaagtggcacgtagtgagagtgctcgcgtggacagg
cactcctctcggcgccgcggctctacccgggtcaaacagtcccgttcccgtagtgatgtg
gatctccagcagccgatttcttccacgacaacatcacctgcccccctcactccccagcac
ctccatcctattgaagggccaagtttagtttttgaggggcctggcccctcccccaccagt
ccctccccacagctggaggagatggacccgcgcttccaagagttggagcaggacccgccc
aattggagggagctggccccttctgaagccctgtccagcctcagcaagaaggagaccaag
aggcaggaggtcatcaacgagttgtttgctacagagcatgctcatgtgcggatgctaagt
gtccttcagacggtcttctccaagccattggagagggacgaactcctgacctccactgag
ctggccgccattttccctaacctggaagagatcattgaaatgcactataccttctatgag
aacctgaagaaactgcgtttggaagatggctttatagtcaaatccatcagcaccacagta
ctcaacagatttggtggtcatgagggggaatggttccaaaaactgacagctcgattctgc
agtcaccagtcgtgggccctggaccagatcaagagcaggcagaggaaagagccacgcttc
aactctttcatactggaggcagagagtaagccccaatgccgcaggctgcagctcaaggac
atcattcccatagagatgcagagactgaccaagtacccgctgctgctggagaatattgcg
aaaaacacagaggacccgacagagaaggaggacatccagcagagcgcagaatgctgcaga
aagatcctcaaccatgtcaatgaggaggtcaaagtgatggagaacctattgactctgaag
gactaccagcgcagactggacacatcagggctcaaaccaagcaatgagctttatactgaa
tataagaacattgacctgactcagaagaagatgctttatgaaggccctctgacttggaga
gtcaccaaggagaaggcaattgaggtgcagtgtgtgttgctcggggacctgctggtgctc
ctgcagaagcaggatgacaagatggtcctcaaatgtcagagcaagagtaacattgccata
caggaaggcaagcaaatgctgagccccattatcaagctggactcggttttccttcgtgag
gtggccacagatcgaaaggccttttatgttatatttacttgggacagcggtgctcagatc
tatgaactggtggctcagtctcttggagagaggaaaacctggactgaagtgataaagtca
gcagtggatgatctgaagaagagtggagcacccatgaagttgccactgcctcctggagtt
ggaggagccccgttcagtccaacgctgactgcccctctgagcccgactgagaatggaagt
ttgaaaagcagcagtgatcgagataaggacagcttgacggatgagaagtcgacagacccc
aggcacacgctgattgatttcctgtcagataaaggctttgacttgataggccactccaac
agcgatcaggagaaggtggccaataatgctttggatgaagtcatgtcgctaaaaaggctg
ttggtcggaagcatcagtctatcagaagactcacaacctgatgaagaaaacggagaggag
caatcagagaggcccaatctagacacggatagctgtcagtcaacagaagaacacagtcag
acaacagacagaggagcggaggaggagaatgagaactcttgtgaaaaagaaggtgcaggg
acgaagggagaggaagagaagagcatcagtgcacccctggtgttgtcccaggagaggatg
gaggaagtatgcaggaggcttcacagtctggaggaacaactaaagagactacagaccgta
gaagaggagcaccacaggctacaggaggccctttccaagttctcactggaggggggtaac
ttccagtaa
DBGET
integrated database retrieval system
