Thunnus thynnus (Atlantic bluefin tuna): 137196227
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Entry
137196227 CDS
T11154
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04010
MAPK signaling pathway
tty04020
Calcium signaling pathway
tty04510
Focal adhesion
tty04540
Gap junction
tty04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137196227
04020 Calcium signaling pathway
137196227
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137196227
04540 Gap junction
137196227
09142 Cell motility
04810 Regulation of actin cytoskeleton
137196227
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tty01001
]
137196227
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tty04090
]
137196227
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
137196227
Protein kinases [BR:
tty01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
137196227
CD molecules [BR:
tty04090
]
Proteins
137196227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
C2-set_2
APH
RIFIN
PKD
VEGFR1-3_N_Ig-like
Stevor
Motif
Other DBs
NCBI-GeneID:
137196227
NCBI-ProteinID:
XP_067465189
LinkDB
All DBs
Position
13:complement(31979690..32009864)
Genome browser
AA seq
1035 aa
AA seq
DB search
MMAPIRGRKGSLNLLHFLLGVFLVEAGVCLELLPSASKVLLNSNSNYTVVCSGWSQVTWR
LPQDIQVGGVTVETQGSSSVLQLLNATWRNSGRYTCEEEFPDESREVDIFIPGQGPEEWF
VPLGPGVVMKESEEDTIPCVVSDPQLSVMLYEGRNRIPVTGTTYEPGHGFTGRLNDTSYV
CVASRGAEERESQVYYVYSIIVPQQMEVELTVSSRVLKQGEPLTVNCTVSDTDMVFFSWV
FPRRQEIEPLTDFLPNRIRSFVNISMATLADSGVYVCAVQETMQGQTVEKNITITVLDRG
YVYLRAGETNVSTLLHHTVELSVEVDAHPAPTVIWTKQNQTVATETTSVTTTHLTDSRYV
STVTLVRVQMDQSGSYTATVSNDDDAAEVVFYLEVKAPPRITSLSEVGSKAVLCVSEGAP
PPSVTWYTCHSSHRCHNMTGSWRSQSGASGGVAVQENITEVEDRGVTQVRSLLTLQSLSS
LSAVRCEAKNSAGRRARDLRILSSSLLSQVAVLAAVLVLVVIAIIFLIILIVLWRKKPRY
EVRWKVIESVSPDGQQYTYLDPAHLPYSSTWEIPRDNVVLGQVLGSGAFGRVVEATVSGL
LHSHSTTKVAVKMVKQSSGAVQSLMSELKVLVHLGPHLNVVNLLGACTRGGPVYLITEFC
RHGDLVNYLQRNKHTFLQSDAHTKSDADGGYMDMNKEESVQYVAMQELSYADIEPAVYET
PYTSPDQQEASSLLLSDSPLLSLNDLLSFSYQISQAMDFLSSRNCVHRDLAARNVLVCEG
KLVKVCDFGLARDLPKDQDYVARGNTFLPVKWMSPESIFQNIYSSQSDVWSYGVLLWEIF
SLGGSPYPDLPMTQEFYCALKRGYRMNRPDHAPHNIFDVMKQCWEEKPQDRPAFSSLVVS
VGNMLTDDYRKRFVQLTDDFLRGENPAVVRSRLSSSRAAEDQTDQTNVSPAPQMKVHLSE
AEPQEAGPSHGTYIIPITDITIETGSGAALDAVSPQLSDYQDAPGAQEVTSSADRQEDAA
PKLSRSRDEDEESSL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgccgatcagaggacggaaaggaagtctgaacctgctgcacttcctgttaggt
gtgttcctggttgaagcaggtgtctgtctggagcttcttccttcagcgtctaaagttctc
ctgaactcaaactccaactacactgtggtgtgttcggggtggagtcaggtgacctggcgg
ttacctcaggacattcaggtgggcggggttactgtggagacacagggctccagcagcgtc
ctgcagctcctgaacgccacctggaggaattctgggagatacacgtgtgaagaggagttc
cctgacgagagccgagaggttgacatattcatacctggacaaggtcctgaggaatggttc
gtcccgctcggtccaggtgtggtgatgaaggagtcggaggaagataccatcccctgcgtg
gtgtctgacccgcagctcagcgtcatgctgtacgagggtcgcaacaggatcccggttacc
gggacgacgtatgagccgggccacggcttcacaggtcgtctgaacgacacgtcgtacgtg
tgcgtggcgtcacgcggagccgaggagagagagtcacaggtgtactacgtctacagcatc
atagtgcctcagcagatggaggtggagctgaccgtgtccagccgggtgttgaagcagggg
gagcctctgacagtaaactgcaccgtctcagacactgacatggtcttcttctcctgggtc
tttccccgcagacaggagatcgagccactgacggacttcctgcccaatcgaatccgctcc
ttcgttaacatctccatggcaacgcttgcagattctggtgtgtatgtgtgtgcagtgcag
gaaacgatgcagggacaaactgtggagaaaaacatcacaataacagtactggatcggggt
tatgtgtacctgcgtgcaggtgagaccaacgtgtcgaccctcctccaccacacggtggag
ctcagcgtggaggtcgacgcccaccctgcccccacagtcatctggaccaaacagaaccaa
actgttgccacggaaaccacctctgtcacaaccacacacctgactgacagcaggtatgtg
agcacggtgacgctggttcgagtccagatggatcagtcaggaagttacacagcgactgtt
tccaacgacgacgacgctgcagaggttgtcttctacctggaggtcaaagcgccccccagg
atcacgtctctgtcggaggttggcagtaaggcggtgctgtgtgtcagtgagggagctccg
cccccatctgtcacctggtacacttgtcacagctcacacaggtgccataacatgacgggc
agctggaggagccaatcaggagcctctgggggcgtggctgtgcaggagaacatcacagag
gtggaggacagaggagtcactcaggtacgcagtctattgactctgcagagtctcagctct
ctgtcagctgttcgctgtgaagccaaaaactctgcaggacgaagagccagagacctgcga
atactgtcctcctctctcctgtcccaggttgcagtgttggcggcggttttggttctggtt
gtcatcgcaatcatcttcctcatcatcctcattgtcctctggagaaaaaaacctcgttat
gaagttcgttggaaggtgatcgagtcagtgagtcctgatggacagcagtacacctacctc
gaccccgcccacctgccatacagctccacctgggaaataccacgagacaacgtagtacta
ggtcaggtgttgggttcaggtgcgtttggtcgtgttgtcgaggcgacggtctctggtctg
cttcactctcactctacgactaaagtggctgtgaagatggtcaaacaaagcagtggtgca
gttcagtctctgatgtcggagttgaaggttttggttcatctcggtcctcacctgaacgtt
gtaaatctgctcggagcgtgcactagaggaggtcctgtctatctgatcactgagttctgt
cgtcatggagacctggtgaactacctgcagcggaacaaacacaccttcctacagagtgac
gcacacaccaagagcgatgctgacggaggctacatggacatgaataaagaggagagcgtt
cagtacgtcgccatgcaggagctcagctacgccgacatcgaacctgcagtgtacgagacg
ccgtacacctcaccagaccagcaggaggcgtcgtctctcctcctcagtgactctcctctc
ctcagcctcaacgacctcctcagcttctcctaccagatctctcaggccatggacttcctc
tcctccagaaactgtgtccacagggacctggcagcgaggaacgtcctggtctgtgagggg
aagctggtgaaggtctgtgacttcggtctggcccgagaccttccgaaggatcaggactac
gtcgccaggggaaacaccttcctgccggtgaagtggatgtcaccagagagcatcttccag
aacatctacagctctcagagcgacgtctggtcctacggagtcctgctgtgggagatcttc
tctctcggtgggagcccgtaccccgacctccccatgacccaggagttttactgcgctctg
aagagaggataccgtatgaaccgccccgaccacgctccccacaacatcttcgatgtgatg
aaacagtgctgggaggagaaacctcaggacagacccgctttctcctcgttggtcgtctcc
gtcggcaacatgctgacggacgactacaggaagcgcttcgtccagctgaccgacgacttc
ctgagaggagaaaatccagctgttgttcgatccagactgagttcatccagagctgctgag
gaccagacagatcagaccaacgtaagtcccgccccccagatgaaagttcacctgtcggag
gcggagccacaggaggcaggcccctcccacggcacctacatcatccccatcactgacatc
accatagaaaccggcagcggcgctgcgctggacgcagtcagccctcagctgtcagactac
caggatgcacctggagcacaggaagtgacatcatcagcggacagacaggaggatgcagcc
cctaagttgtcccgcagccgtgatgaagatgaggagagcagcctgtga
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