Thunnus thynnus (Atlantic bluefin tuna): 137201309
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Entry
137201309 CDS
T11154
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137201309 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137201309 (eftud2)
Spliceosome [BR:
tty03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137201309 (eftud2)
Complex C
U5 SnRNP specific factors
137201309 (eftud2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
137201309
NCBI-ProteinID:
XP_067472385
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All DBs
Position
17:complement(7922053..7935583)
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AA seq
971 aa
AA seq
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MEADLYDEFGNYIGPELDSDDDDDDLEAEDRDVDEGDEDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNRQFTLMEQELPATVYDMEFLAD
LMDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFSKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHISSPQEGARNKIEHTYAGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgagtttggaaactacatcggtccagagctggactctgac
gatgatgatgacgatctggaggcagaggacagagatgtcgatgagggtgatgaagatgat
gatgatgagcctgctgatgctgatgacgatgttcccggcatggaggtggtcctgcacgag
gacaagaagtactatccgacagcagaagaggtttacgggccagaagtggaaactatcgtc
caggaggaagacacacagcctcttacagagcccatcatcaaacctgtgaagaacaggcag
ttcaccctgatggagcaggagttacctgccactgtttatgatatggaattccttgcagat
ttgatggacagtccggagctgattcgtaacgtcaccttgtgtggtcacctccaccacggc
aagacctgtttcgtggactgcctcatcgaacagacacatccagaaatcaggaaaagagat
gatgtggatctccggtacacagacatcctctttacagaacaggagagaggagttggtatc
aagagtaccccggtcacaatggtcctgccagactccagaggcaaatcctacctattcaac
ataatggatacaccaggtcatgtcaacttctctgatgaggtcacatccagcatccggatc
tcggacggcatcgtcctcttcatagacgcagcagagggagtgatgctgaacacagagcgt
ctgatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtggagctcaaactgcctcctacagatgcttattataaactgcgccacatt
gtggacgaggtcaacggtttgctcagtacgtactccacagatgagaacttggtggtttct
cctctcctgggaaacgtgtgcttcgccagctctcagtacagcatctgtttcacactgggg
tcctttgcaaagatctactcggacacttacggtgacataaactataacgagttttcaaag
agactttggggagacatttatttcaaccctaaaactcgcaagttcacaaagaaagctccc
agcagtaactcccagcgcagctttgtggaattcgtcctagagcctctctacaagatcctt
tcacaggttgttggggatgtggacacgtctctcccacgagttctggatgagctggggatc
cacctgactaaagaggaactgaagctgaacattagacccttgctgaggctggtctgtaac
cgcttctttggagagttcacaggctttgtggacatgtgcgtgcaacacatctcctcacca
caagagggcgctaggaacaagatagagcacacctacgctggaggtctggactcggacctg
ggggaggccatggcagaatgtgaccctgatggtcctttgatgtgccataccactaagatg
tacagcacagaggatggggttcagttccatgcatttggcagggtgctaagcgggaccatt
caggcgggtcagcctgtcaaggttttaggagagaactacacccttgaagacgaggaggac
tctcaggtctgcactgtgggtcgtctctggatttctgtcgccagataccaaattgaagtg
aatcgagtgcctgccgggaactgggttctcattgaaggttgcgaccagccgatagtgaag
accgccacaatcacagagcccagagggaacgaagaggctcagattttcaggccgttgaag
ttcaacacggcatcggttatcaagatcgccgtggagcctgtgaacccatcagagctgccg
aaaatgttggacggactgaggaaggtcaacaagagctatccctctctcaccacaaaggtg
gaggagtctggagagcatgttatcttaggcacaggagagctctatctggactgtgtcatg
cacgacctgcgtaagatgtactctgagattgatattaaagttgccgacccagttgtgact
ttctgtgaaacagtcgtggagacgtcatccctcaagtgcttcgctgaaacgcctaacaaa
aagaataagatcaccatgattgcagagcccttggagaagggactggctgaggacatagag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacaaag
tacgactgggatctgttggctgccagatctatctgggcctttggaccggacacgacagga
ccaaacattcttgttgatgatacactgccttctgaggtggacaaggctctgctgggctcg
gtcaaagacagcatcgtccagggcttccagtggggcaccagggaggggcctctgtgtgac
gaacccatcagaaatgtaaagttcaagatcctggatgccgtcatcgctcaggagcccctg
cacagaggaggaggccaggtcatccctacagccaggagagtggtgtactctgctttcctc
atggcgactccgaggttgatggagccttattactttgtggaggttcaggctccggctgat
tgtgtatctgccgtctacacagtgctggctagaagaaggggtcacgtcacccaggatgca
cctattccagggtctcctctctacaccattaaagctttcatcccagccatcgactccttc
ggctttgagacagaccttcgcacacatacacaggggcaggcctttgctctgtctgtgttc
caccactggcagattgttcctggtgaccccttggacaagagtattgtgatcaggcctctc
gagcctcagcccgccccccatctggccagagagttcatgatcaagacccgaaggcgcaag
ggtttgagcgaggatgtgagtatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaagacgtggtgcttaactaccccatgtga
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