Tenuifilum thalassicum: FHG85_05390
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Entry
FHG85_05390 CDS
T06728
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FHG85_05390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttz03400
]
FHG85_05390 (nth)
Enzymes [BR:
ttz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FHG85_05390 (nth)
DNA repair and recombination proteins [BR:
ttz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FHG85_05390 (nth)
Prokaryotic type
FHG85_05390 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QKG79717
UniProt:
A0A7D3XFW9
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All DBs
Position
1310589..1311245
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AA seq
218 aa
AA seq
DB search
MSSKKELYSFVIDYFSSTRPVAETELNYTTPYELLVAVILSAQCTDKRVNMITPGFFKRF
PDAKSLSNATVEEVYELIKSCSYPNNKAKNLLGMAKTLMDEFDGIVPSDIELLQRLPGVG
RKTANVIASVVFNKPAMAVDTHVFRVANRIGLVSNAKTPLAVERQLIKHFPQDLIPKAHH
WLILHGRYICIARKPKCEECGLTPVCKEYKKISRKKEK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaaaaggagttatatagttttgtaatagactattttagtagcacgcgacca
gttgctgagacggagttgaactatacaactccctatgagcttttggtagctgtaatttta
agcgctcagtgcaccgataagcgtgttaacatgataacccctggcttttttaaacgtttc
ccagatgctaagagtctatcgaatgctactgttgaagaggtttatgaacttattaagagc
tgttcatatcccaacaataaagctaaaaaccttttgggaatggcaaaaactctaatggat
gagtttgatggtattgtgccttcggatattgaacttttgcaacgattaccaggagttggt
cgtaaaacagccaacgtgattgcatctgtggttttcaataagcctgcaatggccgtagat
acacatgtttttcgtgtggcaaatagaattgggctggtgagcaatgccaaaacgcccctt
gctgttgagcggcagcttataaaacattttcctcaagaccttattcctaaagcgcatcat
tggttaattttgcatggccgttatatctgcattgcacgtaaacccaaatgcgaagaatgt
ggattaactcctgtttgcaaagagtataagaaaattagtaggaagaaggaaaaataa
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