Triticum urartu (red wild einkorn wheat): 125519756
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Entry
125519756 CDS
T08232
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tua03036
]
125519756
03400 DNA repair and recombination proteins [BR:
tua03400
]
125519756
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125519756
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125519756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
125519756
NCBI-ProteinID:
XP_048540469
LinkDB
All DBs
Position
7:complement(463261151..463294941)
Genome browser
AA seq
1575 aa
AA seq
DB search
MASSASEKWAVVQYGHHGPATKVYQFQILLPNGTSTSLKLRDPGEEMPLPDFLHRIREEL
GDASSHCGQKRGIEWDGDVYLEDLLDRKIDKKVQFSDFVTKGTNILRLQDGEEFVRTYEN
MWDLTPPTELLQELPAEYSTESALADLVDNSLQALWSNGSKEIKLIRITVDGEKIVVFDT
GRGMDGSEDNSISKWGTMGSSNHRVFRKQGIGGKAPYLVPFFGMFGYGGTIASMHLGRTA
IVSSKTKESRKVFTLHLSREALLEKSSSKLSWKTAGGVRDPSEEELALSPHRSFTQVEIH
GLNRHLEPAKLRGFLKDIYFPYIQYDEDNGSASTRRPVQFEVNGVDLAEIQESEVTLTNL
HSSNGPDFHLHLKFACTSTNAASRQAHARIKCVYFPIVKGKESIDSILEKLSENALGVKE
NFDNFSHVSVRRLGRLLPDARWGSLPFMEPKQSKGQKAELLKRCCKRVKCFVETDAGFNP
TLSKTDLAQHDVFTKALRCFDGSCRNHSSVEEVSVDARKGERSLNRTQLEKQYHDWINNM
HAKYDVEMDGGDDEHTVIINPSNKERLGISKDVEVIRVHTSVSRKGKTWRRGDHLKIQPG
VVARMKNNFYSSKSNFYGTLEYVVVEGLRGDICGEARLICRSIECSGDQGCLLEVGQDSV
HLNIKESFSFPISVIDDNKCQTMDEDSWCQMLRKKSAKAPACIEVLRNLHGNDLAIDGDV
PFEKVITAGYNLPREIIAVIRPQNATTCSTSLLDKRYIVKDDDLEMAMEIYHLPGSKDHL
HAKLIYKKLKKPSSRNSINGLYIFQLSEETSMFTKSGVYSFIFSVRCRDSIVIKHETRIT
VRPNSNTRHWQLSCDADWSADNAVVDIRLGMPVRCLAARSHDLYGNGIPFLDIHKAVITI
LGGDDILAQVKDIKVDLSTDLLTLYIRDFLFKTNKLDRVRPNYEAMLKISLSDSELSHPC
KVKPGLPSTINMDMSLAWEKNLTPGEVIDDALLEVLDHCGNHVEEGTELIVNTVGFSFVD
KCGPVRKVNSKGFVDLRGMLKVVSGFGSEVCLTIFDHKKKIFNRTFQIAIRNLKAVKVPE
SCPAGTFLENIIFEVSDCDGVIDESIHGLQHTLSIRSNQLKDVQGAQYAFEHGRCVLPRA
QVPNEPGTVSFVAYHTHFADLETIIQIHVYALDLVRVNSENDFEPICSYPTSSLSSQDLL
SPSQLASCQSVRYIEDALRKVSDEIESIDSNIRSEEEMIKFLDSQKKSVENRIASLKDEI
GHRVGAKEITRHKIEENVGTAAAVLCNLSNRKAYAPGRSFKDEVVGIVALLGTVANRELS
RMLSVYLGEDNMLAVVCKTQDAANYFEKYDTEGNVDIRFGIHQEAAKLGVPISRRFPIIC
LDEIRPYNGDVFWNIRQKKLNLPFPHAETPKGFRGFAVNLINLSAENLEIITSSGHGLRE
TLFYRLFGELQVYETRNDMRQAMPHLRNGAISLDGGIIKGDGMLLLGYSDPEIIFPVMPD
APDILEDPEDVFTKVKKMNAEKNVLETVENKIRRAEENRQKLVMKRNKKKRKFDEMAEVM
SQPSGSQLDQYHPVS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcgcatccgagaagtgggccgtggtgcaatacggacaccacggtcctgca
accaaagtctaccagtttcagatcctgttgccaaatggcacaagcaccagccttaagctg
cgcgatcctggagaagagatgccgcttcctgatttcttacatcgtattcgggaagagttg
ggcgatgcctcctcacattgtggtcaaaagcggggaattgaatgggatggcgatgtttat
ctagaggacctgctggacagaaagatagacaagaaagtgcagttcagtgattttgtcact
aagggtactaacatattaagacttcaggatggtgaagaatttgtcaggacatatgagaat
atgtgggaccttacacctccgactgaactgcttcaagagcttccggcagaatatagcact
gagagtgctcttgcagaccttgttgacaactcattacaggctttgtggtcaaatggtagc
aaagaaataaagttaatcaggataactgttgatggagaaaagattgtggtctttgatact
ggtagggggatggacggttcagaagataattctatctctaaatggggtacaatgggttct
tctaaccacagagtatttcggaaacaaggtatcggcgggaaagcgccatacttagtgcct
ttctttggcatgtttggctatggtggaactattgcatcgatgcatcttggaagaactgcc
atagtttcttctaaaactaaggaatcaaggaaagtgtttaccttgcatctttcgagggag
gctctgttggagaagtcttcatctaaactcagctggaagactgctggaggagttagagat
ccatctgaagaagagttggcactgtcgccacatcgaagttttacacaggtggaaatccac
ggcttgaataggcacttggagccagctaaacttcgaggatttctgaaggacatatatttt
ccatatatacagtatgacgaggataatggatctgcgagtacaaggaggccagttcaattt
gaggtgaatggtgtagatttagcagaaatacaggaaagtgaagtgacacttactaatctg
cactcttctaatggtcctgattttcatctgcatctaaaatttgcttgtacttcaacaaat
gcagctagtcgccaagcacatgctcggatcaagtgtgtatactttccaattgtcaaggga
aaagaatctatcgattctattttagaaaagttaagcgaaaatgccttgggggtgaaagaa
aactttgacaatttttcacatgtgtcagtccgccgacttggccggttactccctgatgca
agatggggttctcttccgttcatggaacctaaacagagtaaaggacaaaaggctgaactc
ctgaagcgatgctgcaagagagtgaaatgctttgttgaaacggatgcgggttttaatcca
actctttctaagactgatttagcacaacacgatgtttttactaaggcacttcgctgcttt
gatggcagttgtcgtaatcacagctcagttgaggaggttagtgttgatgctcgtaaaggt
gaaagatcactaaatcgtacgcaattggagaagcagtatcatgactggattaataatatg
catgcaaagtatgatgtggaaatggacggaggggacgacgagcatactgttattatcaac
ccaagcaacaaggagcgacttggaatatctaaagatgtcgaagttattagagttcacacc
tcggttagcagaaaaggaaaaacatggagaagaggagatcatctgaaaatccaaccagga
gtagttgcacgaatgaaaaacaatttctactcatcgaaaagcaatttctatggaacactg
gaatatgttgttgttgaaggacttcgaggagatatctgtggtgaagctcgacttatatgc
aggtctattgagtgctctggtgatcaaggttgcttactcgaggtaggtcaagatagtgtg
caccttaatatcaaggaatctttctccttccctatcagcgtgatagatgataacaagtgt
caaaccatggacgaggattcgtggtgtcaaatgcttagaaagaaaagtgcaaaggctcca
gcgtgtattgaggtcttacggaatttacatggcaatgatcttgctatagatggggatgta
ccgtttgaaaaagttataacggctggttataaccttccacgtgaaataatagctgtaatc
cggccacaaaatgctactacctgctccaccagcctccttgacaagagatatattgtgaag
gatgatgatctagagatggcaatggagatttatcatctgcctggaagcaaagatcatctt
catgcaaagcttatttataaaaagctcaagaaaccctcatcgcgcaatagcataaatgga
ctgtatatctttcagttgagcgaagagacaagcatgtttactaaatctggtgtttacagt
tttattttctcagttaggtgcagagattcaattgtcattaagcatgaaacgaggataaca
gttcgtccaaactccaatactagacattggcagttatcctgcgatgctgattggtctgct
gacaatgctgtagtagatataaggcttggaatgccagttagatgtcttgcagctagaagc
catgatttgtatgggaacggaattcctttccttgatatacataaggccgtcataactata
cttggtggtgatgatattctggctcaggttaaggacatcaaagtggatctctcaacagat
ttattgactctgtatatcagggattttctgttcaaaaccaacaaattggacagagtaagg
ccgaattatgaagcgatgttaaagatttctttatctgatagtgaactctctcatccatgt
aaagttaagccaggtcttccgtcaacaattaatatggatatgtcccttgcttgggagaag
aatttaactcctggagaagttattgatgatgcccttctagaggtgctcgatcattgtggc
aatcatgttgaagaagggacggaacttattgtcaatactgttggattctcctttgtagat
aaatgcggacctgttcgaaaggtaaacagcaaaggatttgttgacctacgtggaatgctt
aaagttgttagcggatttggttcagaagtttgtttgacgatttttgatcacaagaaaaag
attttcaatagaacatttcaaattgctatcaggaatttgaaagctgttaaggttccggaa
agttgtcctgctgggaccttcttggagaacataatatttgaagtttctgactgtgatgga
gtgattgacgagtcaatacatggactccaacatacacttagcatcaggtcgaatcaatta
aaagatgtgcaaggagcacaatatgcatttgaacatggaagatgtgttcttcctcgtgca
caggttcctaatgaaccaggaacagtcagttttgtggcatatcatacacattttgctgac
ctggaaacaataattcagattcatgtttatgctcttgatttagtgcgagtaaactcggag
aacgactttgaacctatatgcagctacccaacttcatctctatcaagtcaagatctttta
tctccaagtcaacttgcttcttgtcaatctgttagatacattgaggatgctctgaggaaa
gtttctgatgagattgaatcaattgattccaatatacgctctgaagaagaaatgattaaa
tttcttgattctcaaaagaaatctgtggagaatcgtattgccagtctgaaagatgagatt
ggccacagagttggcgcaaaagagataactcgtcataaaattgaagagaatgttggtact
gctgctgctgttctatgtaatctctccaaccgtaaagcatatgcaccagggcgatctttc
aaggatgaagttgttggtattgttgctcttctcggaactgttgctaacagagagctcagt
aggatgctttctgtgtatcttggtgaagacaacatgcttgcagtggtttgcaagactcag
gacgctgctaattactttgaaaaatatgacactgaaggaaatgtggatattcgctttggt
attcatcaggaagcagctaaactaggagtcccaataagcaggagatttcctatcatatgc
ctggatgaaataaggccatataatggagacgtcttttggaacataaggcaaaaaaagcta
aatctgccttttccacatgcggagacgcccaagggatttcgtgggtttgcagtcaacttg
atcaatctttctgcagagaacttggagataatcacaagtagtggacatggtctccgtgaa
accttattttataggctctttggagagcttcaagtttatgaaacacggaatgacatgcgg
caagcaatgcctcatttgaggaatggggctatatctttggatggtgggattataaagggt
gatggtatgctgctgcttggttacagtgacccggagatcatatttcccgtcatgcctgat
gctcctgacattctggaagaccctgaggatgtgttcaccaaagtaaaaaagatgaacgca
gagaagaatgttctggaaacagtggagaacaagataagaagagctgaagagaatcggcag
aaattggtcatgaagcgcaacaagaagaaacgcaaattcgacgagatggcggaggtaatg
agccagcccagtggcagccagcttgatcagtatcacccagtgtcatag
DBGET
integrated database retrieval system
