KEGG   Triticum urartu (red wild einkorn wheat): 125550894
Entry
125550894         CDS       T08232                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125550894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tua03021]
    125550894
Enzymes [BR:tua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     125550894
Transcription machinery [BR:tua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     125550894
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 Zn_ribbon_2
Other DBs
NCBI-GeneID: 125550894
NCBI-ProteinID: XP_048569969
LinkDB
Position
1:110490864..110502686
AA seq 1425 aa
MEEPNAEMGMPTGELKGITFYLMTNTEMEKSSSVSIVEPSDVSSAKLGLPNGAPQCETCG
AQSVRECDGHSGVIKLPATVFNPHLFEEVVQLLNQICPGCHTPKQNRDSKRSDGATSQAT
CKYCSKDGTKQYPDVIFKTLTSPRMTLSKAKLQRDPSVMDKISLTAEVADRVTDSAEVLP
LDYWDFVPHHHPPQSNMTKILLSPYQASHILKQLDPELFSRFASRPELIFLSCLPVTPNF
HRVXELPYGFSDGPRLAYDDLTKAYKRTVDVGRKLDDLRQHPQFSVLASSLVTSRVVECL
KLSKLHSKKTDKESSTDTHGMKWLKDAILSKRSDNAFRGTMVGDPKIRLHEIGIPVDLAS
NLLVSEHVNSYNFDSINSKCNCYLLANEKLVIKRSGKTIIVRKPNQLVIGDTVHRLLQDG
DLILINRPPSIHQHSVIGLSAKLLPVQSVLSINPLCCAPLAGDFDGDCLHGYVPQSIQSR
VELEELVSLSHQLLNAQDGRSLVSLTHDSLAAAYLLTSSEVLLKKTEVQQFQMLLCHPLS
PTPGPAIMKSIHSHGPLWTGKQLFSMLLPSDMSFSIEPKVHIIDGEVLACPSESFWLQNS
ISGLFSVMFKQYGDKALELLSSAQDVLCEFLTMRGLSVSLSDIYLFPDHDSRRKLADGVN
LALDDAEEAFRIKQILLSPDSISILKCYDDCADLSQSYEQSNFIQSNLPIIKSSIMAFKS
VFSDLQKMVQQHTAKNNSMMMMTNAGSKGSMLKFVQQTACVGLQLPASRFPFRIPSELSC
ASWNRHKSEGTGECLGGQNLYAVIRNSFAGGLNPLECLLHSISGRANFFSENADVPGTLT
RKLMYHLRDLYVAYDGTVRSSYGQQIMQFTYDTAEDMCSDRNVEGELGAPVGSWAACSIS
EAAYGALDHPVNSLEESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYGLEYASLE
VKDHLEPVNFSDLVDTVMILYGGCGIESTKGSAWITHFHLSQEMMTKKRLGLTLVVEELT
EQYNAKRDKLNFPKVYISKGKCSADNECGNRQTCCITVVTQDDSNSMSQLDTIKKRVIPN
LLALLVKGFLEFKKVEIQCQEDSELVVKVVMSEEHCKSVKFWATLQKSCIAIMELIDWER
SRPGSVYDIFCSYGIDSAWKYFVESLRSKTDDIGRNIRREHLLVVANCLSVSGQFHGLSS
QGLKQQRTRLSISSPFSEACFSRPAHTFINAAKQSSVDNLCGTVDAMAWGKEPSTGTSGP
FKIIYSGKAHAPIPNENIYDFLNSPEVRQAPGEAFLNGSTISVEQDFLVAAVGIWDSIID
MRTCLQNMLREYQLNECVGELDKSRVIEALRFHPRGREKIGAGIEDIKIGHHPSHPGTRC
FIMVRDDGTTEDFSYKKCVQGAADSISPELGRYVERILRNRAVSS
NT seq 4278 nt   +upstreamnt  +downstreamnt
atggaggagccaaatgctgaaatgggaatgccaaccggggagctgaaaggcatcacattc
tatctcatgaccaatacagagatggaaaagtcaagcagcgtgagcattgtagaaccatct
gatgtcagtagtgccaagttgggactaccaaatggggcaccacagtgtgagacttgcgga
gcgcagagtgtgcgtgaatgtgatggtcattctggcgtgattaagctgccagcaactgtg
ttcaacccgcatctattcgaggaagttgttcagttactgaatcagatatgtcctggctgc
cacactccaaagcagaacagagattcaaagaggtcggatggggcaacaagtcaagcaact
tgcaagtattgctcaaaggatggcactaaacaataccccgatgtaatctttaagacactg
acaagcccaagaatgacactgtccaaggctaaacttcaacgggatcctagcgttatggac
aaaatttcgcttactgcagaagttgctgacagagtgactgattcagctgaagttcttccc
ctggactattgggatttcgtacctcatcaccacccccctcaatcaaatatgaccaagata
ttactgtctccataccaagcctctcacatattgaaacaacttgatcctgagctatttagc
cggtttgcttcaaggccggagctaattttcctgtcgtgtttgccggtcactcctaacttc
catcgcgtgncggagttgccctatgggttttcagatggccctcgcctagcttatgatgac
ctgacaaaagcttacaagaggacggttgatgtcggtaggaaacttgatgacttgcgtcag
catccacagttcagtgttcttgcaagttcacttgtcacaagccgagttgtggagtgcctc
aaattgtcaaagttacactctaaaaagacagataaggagtcatcaacagacacacatgga
atgaaatggttgaaggatgccattctcagcaaacggtccgataatgcttttcggggtact
atggtcggtgatccgaagattagattgcatgaaattggcatccctgtggatttagcttcg
aacttgttagtttctgagcatgtgaactcctacaactttgacagcataaattcgaagtgc
aactgttaccttcttgccaatgaaaaactagtcattaagcgcagtggaaagacaattatt
gttcggaagccaaatcagctggtaattggtgacactgtgcacaggctgttgcaggatggt
gaccttattcttatcaataggccaccgtcaatacatcaacactccgttattggactctct
gcaaaattactcccagttcagtcggtactttcaatcaacccactctgttgtgcaccactc
gcgggagattttgatggggactgtttgcatggatatgtcccacagtccatacagtcaaga
gttgagcttgaggagctagttagtttgagccaccaactattgaacgcgcaagatgggcga
agtttggtgtcattaacacatgactctctagctgcagcatatctgttaacaagctcagag
gttttactaaagaaaactgaagttcagcaatttcaaatgttattatgccatccactctcg
ccgacaccagggccagcaataatgaaatctatacactctcatggtccactgtggaccggt
aagcagttgttcagcatgctgcttccgtctgatatgagtttcagcattgagcctaaggta
cacatcatagacggtgaagttcttgcctgcccatctgaatctttttggctgcagaatagc
atatctggccttttttccgtcatgttcaaacaatatggcgacaaggctcttgagttactc
tcttctgctcaggatgtactatgtgagtttttaaccatgagaggtttaagtgtcagtctt
tcggatatctatctgttcccagaccatgactcgaggagaaaactagctgatggagttaat
ctggcattggatgatgctgaagaggcttttcgtattaaacagatattgctaagtccagat
tccatatcgattctgaaatgttatgacgactgtgctgatttatcacaatcttatgaacag
tccaatttcattcagagcaatctgccaattataaaatcttcaatcatggcgtttaagagt
gtattcagtgatcttcagaagatggttcaacagcacacagccaaaaataattcaatgatg
atgatgactaatgcaggaagtaagggtagcatgttgaagtttgtgcaacaaactgcatgc
gtcggtcttcaacttccagcaagcagattcccctttagaattccatcggaactctcatgt
gccagctggaataggcataaatctgagggcacgggtgaatgcttgggaggccaaaacttg
tatgctgtgatcaggaattcctttgctggtggtttaaatccattggagtgtcttcttcat
tcgatatctggcagggcaaacttcttcagtgagaatgcagatgttcccgggactttaaca
agaaaactaatgtatcacctgagggatttatatgttgcttatgatgggactgttagaagt
tcttacgggcagcagataatgcagttcacttatgatactgctgaagacatgtgcagtgat
cgcaatgtggaaggtgaacttggtgcccctgttggttcatgggctgcttgttccatttca
gaagctgcatatggagctttggatcacccagtgaacagcttggaggaatctcctctcatg
aatttgcaggatgtattgaagtgccagaagggtggtacttctatggatcatgttggtttg
cttttcctgtcaaagaatctaaaaaaatatagatatggtttggagtatgcatcgctagaa
gttaaggatcatctcgagccagtgaacttctctgatttggttgacaccgtcatgatccta
tatgggggatgtggtatagagtcaacaaaaggaagcgcatggattactcattttcatcta
agccaggaaatgatgacgaaaaaaagattgggactaacacttgttgtggaagagcttaca
gaacaatacaatgccaaaagagacaagttaaacttccctaaagtttatatttcaaagggc
aaatgttctgctgacaatgagtgcggtaacaggcagacttgttgcatcactgtggtaaca
caggatgattcaaactctatgtctcaattggacactatcaagaaaagggtgattccaaac
ctcctggccttactagtgaaaggatttttggaatttaagaaagttgagatccagtgtcaa
gaggacagtgaacttgttgtgaaagttgttatgtctgaggagcattgcaagagtgttaag
ttttgggctactctacaaaagtcttgcatagcaattatggagttgattgactgggagcgg
agccggccagggagcgtatatgatattttctgctcatatggcatagactcagcgtggaaa
tactttgttgaatctttaagatcaaaaactgatgatattggaaggaatattcgccgcgaa
cacttgctggtcgtggcaaattgcctgtctgtaagtgggcagttccatggactaagcagt
caaggtttgaagcaacaacggactcgattatcaatctcatctccattttctgaagcttgt
ttttctaggcctgcacatacttttataaatgctgcaaagcagtcttcagtggacaatctc
tgtggtactgtagatgcaatggcctggggcaaggagccttctactgggacatcgggtcct
ttcaagattatttattctgggaaggcgcatgcacccataccaaatgagaacatctatgac
ttcctaaatagccctgaagttcggcaagcgccgggcgaagctttcttgaatggtagcacc
atatctgtggagcaagattttcttgttgctgcagttggtatatgggacagcattattgat
atgcgcacttgcttgcagaacatgctacgagagtaccaattaaatgaatgtgttggggag
ctagataaatcacgtgtaatcgaggccctgagatttcatcccagagggcgtgaaaagatt
ggtgctggaatagaagatataaagattggacatcatcctagtcacccaggaacaaggtgc
ttcattatggtacgggatgacggcacaactgaagacttttcttacaagaaatgtgtccag
ggtgccgcggattctatctcgcctgagctcggacgttatgtagagaggatactacggaac
agagcagtttcgtcataa

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