KEGG   Tupaia chinensis (Chinese tree shrew): 102468505
Entry
102468505         CDS       T02978                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03250  Viral life cycle - HIV-1
tup05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102468505
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102468505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102468505
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102468505
SSDB
Motif
Pfam: NAD2 APOBEC2 APOBEC_N NAD1 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 TetR_C_17
Other DBs
NCBI-GeneID: 102468505
NCBI-ProteinID: XP_006155445
LinkDB
Position
Un
AA seq 170 aa
MERLFQNTFYFHFQNLTYISNQKTTFLCYRVDKVERHGTVLLDKGVFTHQFHPSCHAELR
FLSFCDDNLSPDEDYQVTWYLSWSPCPACAKQVADFLAAHRNVRLTIVTARLYYFWDPEF
KDGLRRMYEEGAEVAIISPQDFENCWEDFVFNKGRDFCPWENTVENHQSL
NT seq 511 nt   +upstreamnt  +downstreamnt
atggagcggttatttcaaaacacattttactttcactttcaaaacctaacatatatctcc
aaccagaaaaccaccttcctgtgctaccgagtggacaaagttgagcgacacggcacagtg
ctcctggacaagggggtcttcacacaccagttccatccttcctgccatgcagaattgcgc
tttctctcgttctgtgatgacaacctctcccctgatgaggactaccaggtcacctggtac
ttgtcctggagcccctgccctgcgtgtgcgaagcaggtggccgacttcctggctgcgcac
cgcaacgtgaggctgaccatcgtcaccgcccgactctactacttctgggacccggaattc
aaggatgggcttcgcagaatgtatgaggaaggggctgaggtggcgatcatatccccccaa
gattttgaaaactgctgggaggacttcgtgttcaacaagggaagggacttttgtccttgg
gagaacacggttgaaaaccatcagtccctgc

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