Tupaia chinensis (Chinese tree shrew): 102472372
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Entry
102472372 CDS
T02978
Symbol
SCN4A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 4
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tup04040
]
102472372 (SCN4A)
Ion channels [BR:
tup04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102472372 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
102472372
NCBI-ProteinID:
XP_006146854
LinkDB
All DBs
Position
Un
AA seq
1845 aa
AA seq
DB search
MPNPSVPTLPLGPHCLRPFTRESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEAG
KSLPLIFGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSIIR
RGAIKVLIHALFSMFIMITILTNCVFMTMSNPPPWSKNVEYTFTGIYTFESLIKMLARGF
CIDDFTFLRDPWNWLDFSVILMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTWY
SNDTWYNDTWNNDTWNSQESWAGNSTFDWDAYINDEGNFYFLEGANDALLCGNSSDAGHC
PEGYECIKAGRNPNYGYTSFDTLSPAXXXXXXXXXXXFRLMTQDYWENLFQLTLRAAGKT
YMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEEL
EKAKAAQALEGGEAVGDPAITKDCNGSLDTAPGEKGPPRQSCSADSAISDAMEELEEAHQ
KCPPWWYKCAHKVLIWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPM
TEEFDSVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANV
QGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKDCVCKIAGDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVF
LMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLMG
LLRGKILSPKDIMLSLGKPGGAQEAAEAGEAGEGGPEGEKKEPPPEEGDKDLKKDNHILN
HVGLADGPPSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDGKKPPP
PLYDGNSSICSTADYKPPEEDPEEQVEEDPEGEQPEECFTEACVQRCPCLYVDISQGRGK
MWWTLRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYI
FILEMLLKWVAYGFKVYFTNAWCWLDFPLLDLRVSIISLVANWLGYSELGPIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTT
TSERFEISEVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAA
VDSREKEEQPSYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDIAIMILICLNMVTMMVE
TDDQSQLKVDILYNINMVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLAL
SDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLHPILNSGPPDC
DPTLENPGTSIRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLG
EDDFEMFYETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDK
IHCLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIK
IQRAYRRHLLQRSVKQASYMYRHSQDGSGDGGPEKEGLIASTMSKLYGHENGDSSVQSPG
DQQSSTGDTGASVGLTPIQPSDAALPPSPPPPGQTVRPGVKESLV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacccatctgtgcccaccctgcctctggggccccactgcctgcgccccttcacc
cgggagtccctggcagccatagagcagcgggcagtagaggaggaggcccggctgcagcgg
aacaagcagatggagatcgaggagccagaacggaagccacgcagtgacctggaggccggc
aagagcctacccctgatctttggggaccccccgccggaggtcattggcatcccactggaa
gacctggacccctactacagcgacaagaagaccttcattgtgctcaacaagggcaaggcc
atcttccgcttctcggccacgcccgcgctctacatgctgagtcccttcagcatcatcagg
cgtggcgccatcaaggtgctcatccatgcgctgttcagcatgttcatcatgatcaccatc
ttgaccaactgtgtgttcatgaccatgagcaacccgccgccctggtcgaagaacgtggag
tacaccttcaccgggatctacacgtttgagtctctcatcaagatgctggcccgaggcttc
tgcattgatgacttcacattcctccgggacccctggaactggctggacttcagtgtcatc
ctgatggcgtacgtgacggagtttgtggacttgggcaacatctcagccctgaggaccttc
cgggtgctgcgagccctgaaaaccatcacagtcatcccaggcctgaagacgatcgtaggg
gccctgatccagtcggtgaaaaagctgtcggacgtgatgatcctcaccgtcttctgcctg
agcgtcttcgccctggtggggctgcagctcttcatggggaacctgcggcagaagtgtgtg
cgctggcccccgcccttcaacgacaccaacaccacgtggtacggcaacgacacatggtac
agcaatgacacgtggtacaacgacacgtggaacaacgacacgtggaacagtcaggagagc
tgggctggcaactcgacctttgactgggatgcctacatcaatgatgaagggaacttctac
ttcctggagggtgccaatgacgccctgctctgtggaaacagcagcgatgcagggcactgc
ccagagggttacgagtgcataaaggctgggcggaaccccaactacggctacaccagcttc
gacaccctcagcccggcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttccgcctc
atgacacaagactactgggagaacctcttccagctgacccttcgagcagccggcaagacc
tacatgatcttcttcgtggtcatcattttcctgggctccttctacctcatcaaccttatc
ctggcggtggtggccatggcctatgcggagcagaacgaggccactctggccgaggatcag
gagaaagaggaggagtttcagcaaatgctcgagaagttcaaaaagcagcaggaggagctg
gagaaggccaaggccgcccaggctctggagggcggggaggcagtcggggatcctgccatc
accaaagattgcaacggcagcctggacacggcaccaggggagaagggacccccaaggcag
agctgcagtgcagacagcgccatctcggatgctatggaagagctggaagaagcccaccag
aagtgcccaccctggtggtacaagtgtgcccacaaagtgctcatttggaactgctgtgcc
ccgtgggtgaagttcaagcacatcatccacctgatcgtcatggacccctttgtggacctg
ggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggagcactaccccatg
accgaggagttcgactccgtgctcaccgtgggcaacctggtcttcacgggcatcttcacc
gcagagatggtcctgaagctgatcgccatggacccctacgagtacttccagcagggctgg
aacatcttcgacagtttcatcgtcaccctcagcctggtggagctgggcctggccaacgtg
caggggctctctgtgctccgctccttccgtctgctgcgggtcttcaagctggccaagtcg
tggccgacgctgaacatgctcatcaagatcatcggcaactcggtgggggcgctgggcaac
ctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttc
ggcaagagctacaaggactgcgtgtgcaagatcgccggggactgcagcctgccccgctgg
cacatgcacgacttcttccactccttcctcatcgtcttccgcatcctctgcggcgagtgg
atcgagaccatgtgggactgcatggaggtggctgggcaggccatgtgcctcaccgtcttc
ctcatggtcatggtcatcggcaatcttgtggtcctgaacctgttcctggctctgctgctg
agctccttcagcgccgacagcctggcggcctctgacgaggacggcgagatgaacaacctg
cagatcgccatcggccgcatcaagtggggcatcggcttcgccaaggccttcctgatgggg
ctgctgcgcggcaagatcctgagccccaaggacatcatgctcagcctcgggaagcccggc
ggagcccaggaggccgcagaggccggggaggccggagagggtggccctgagggcgagaag
aaggaaccgccgcctgaggagggtgacaaggacctgaagaaggacaaccacatcctgaac
cacgtgggcctggctgacggccctccctccagcatcgagctagaccacctcaacttcatc
aacaacccctacctgaccatccaggtgcccatcgcctccgaggagtcggacctcgagatg
cccacggaggaggagaccgacactttctcggagcccgaggatggcaagaagccgccgccc
cctctctacgacgggaactcctccatctgcagcacggctgactacaagccccccgaggag
gaccccgaggagcaggtcgaggaagaccctgaaggggagcagcccgaggaatgtttcact
gaggcctgtgtgcagcgctgcccctgcctctatgtggacatctcccagggccgcgggaag
atgtggtggaccctccgcagggcctgcttcaagattgtcgaacacaactggtttgagacc
ttcatcgtcttcatgattctactcagcagcggggccctggccttcgaggacatctacatc
gagcagcggcgagtcatccgcaccatcctggagtacgccgacaaggtcttcacctacatc
ttcatcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtacttcaccaac
gcctggtgctggctcgacttccccctcctggacctgcgtgtctccatcatcagcctggtg
gccaactggctgggctactcagagctcggacccatcaagtccctgcggacgctgagggcc
ctgcgtcccctgagggctctgtcccggttcgagggcatgagggtggtggtgaacgccctc
ctgggagccatcccctccatcatgaacgtactgctggtctgcctcatcttctggctcatc
ttcagcatcatgggcgtcaacctgtttgccggcaagttctactactgcattaacaccacc
acctcggagaggttcgagatctccgaggtcaacaacaagtccgagtgcgagagcctcatg
cacacgggccaggtccgctggctcaacgtcaaggtcaactacgacaacgtgggcctgggc
tacctctccctcctgcaggtggccaccttcaagggttggatggacattatgtatgcagcc
gtggactcccgggagaaggaagagcagccgtcatatgaggtgaacctctacatgtacctc
tacttcgtcatcttcatcatcttcggctccttcttcaccctcaacctcttcatcggcgtc
atcatcgacaacttcaaccagcagaagaagaagtttggagggaaggacatcttcatgaca
gaggaacagaagaaatactacaatgccatgaagaagcttggctccaagaagcctcagaag
ccaatcccacgaccccagaacaagatccagggcatggtgtatgacttcgtgacgaagcag
gtgttcgacatcgccatcatgatcctcatctgcctcaacatggtcaccatgatggtggag
acggacgaccagagccagctcaaggtggacatcctgtacaacatcaacatggtcttcatc
atcatcttcactggggagtgtgtgctcaagatgctcgccctgcgccagtactacttcacc
gtcggctggaacatcttcgacttcgtggtggtcatcctgtccatcgtgggcctcgcgctc
tctgacctgatccagaaatacttcgtgtcgcccacactgttccgtgtgatccgcctggcg
cggatcgggcgcgtcctacggctgatccgtggggccaagggcatccggacgctgctcttc
gccctcatgatgtccctgcccgccctcttcaacatcggcctccttctcttcctggtcatg
tttatctactccatcttcggcatgtccaacttcgcctacgtcaagaaggagtcgggcatc
gatgacatgttcaacttcgagaccttcggcaacagcatcatctgcctctttgagatcacc
acttcagctggctgggacgggctcctccaccccatcctcaatagcggacccccagactgc
gaccccaccctggagaacccaggcaccagcatccggggtgactgtggaaacccgtccatc
ggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatgtac
atcgccatcatcctggagaacttcaacgtggccacggaggagagcagcgagcccctcggc
gaggacgacttcgagatgttctacgagacgtgggagaagttcgaccccgacgccacccag
ttcatcgcctacagccgcctctccgacttcgtggacaccctgcaggagccgctgcggatc
gccaagcccaacaagatcaagctcatcacactggacctgcccatggtgccaggagacaag
atccactgcctggacatcctcttcgccctgaccaaggaggtgctgggcgactccggggag
atggatgccctcaagcagaccatggaggagaagttcatggcggccaatccctccaaggtc
tcctacgagcccatcactaccaccctgaagcggaagcacgaggaggtctgtgccatcaag
atccagcgggcctaccgccggcatctgctgcagcgctcggtgaagcaggcgtcatacatg
taccgccacagccaggatggcagtggggacgggggtcccgagaaggaggggctcatcgct
agcaccatgagcaagctgtatggccacgagaatggggacagcagtgtgcagagcccgggg
gaccagcagagctctacgggggacactggagcctctgtggggctcacgcccatccagccc
tctgatgctgccctgcctccctccccaccaccaccggggcaaacagtgcgcccgggggtc
aaagagtctctagtgtag
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integrated database retrieval system
