KEGG   Tupaia chinensis (Chinese tree shrew): 102476613
Entry
102476613         CDS       T02978                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03250  Viral life cycle - HIV-1
tup05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102476613
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102476613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tup03019]
    102476613
Messenger RNA biogenesis [BR:tup03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102476613
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 DUF7136
Other DBs
NCBI-GeneID: 102476613
NCBI-ProteinID: XP_006167224
LinkDB
Position
Un
AA seq 320 aa
LLPSQVWSSYHAELCFLSWFCNDILSPNEDYQVTWYLSWSPCPACAKQVADFLAAHRNVR
LTIVTARLYYFWDPEFKDGLHRMYEEGAKVVIMSPQDFENCWKGFVFNEGRDFCPWEKTV
ENHQSLCIILQEILRHPMERLDPDTFYFQFKNLSFARDRNTTFLCYQLDRTESQGTVPPD
RGIFKNQVHPSYHAELRFLLWFCKDILSPDKDFQVTWYLSWSPCPNCAKWVADFLAAHRN
VSLTILTARLYYFWDQKFRNGLRRLCEEGARVAIMSPQDYETCWEDFVWNEGRNFRPWYN
MGRNYQFLASTLEEILGPHS
NT seq 963 nt   +upstreamnt  +downstreamnt
cttctcccctcccaggtctggtcttcctaccatgcagaattgtgctttctctcgtggttt
tgcaatgacatcctgtcccctaatgaggactaccaggtcacctggtacttgtcctggagc
ccctgccctgcgtgtgcgaagcaggtggccgacttcctggctgcgcaccgcaacgtgagg
ctgaccatcgtcaccgcccgactctactacttctgggacccggaattcaaggatgggctt
cacagaatgtatgaggaaggggctaaggtggtgatcatgtccccccaagattttgaaaac
tgctggaaaggcttcgtgttcaacgagggaagggacttttgtccttgggagaaaacggtt
gaaaaccatcagtccctgtgcatcattctgcaggagatcctcagacacccgatggagcgc
ttggacccagacacattctacttccagttcaaaaacctcagctttgccagggatcggaac
accaccttcctgtgctaccagttggacagaacggagtcgcagggcactgtcccccctgac
aggggcatctttaagaaccaggtccatccttcctaccacgcagaattgcgctttctcttg
tggttctgcaaagatatcctgtcccctgacaaggacttccaggtcacctggtacttgtcc
tggagcccctgccctaactgtgcgaagtgggtggccgacttcctggccgcgcaccggaac
gtgagcctgaccatcctcaccgcccgactctactacttctgggaccaaaaattcaggaat
gggcttcgcagactctgtgaggaaggggcccgggtggcaatcatgtccccccaagattat
gaaacctgctgggaagactttgtgtggaacgagggacggaacttcaggccttggtataat
atgggtagaaattaccagttcctggccagcacgctggaagagatcctcggtcctcactct
tga

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