KEGG   Tupaia chinensis (Chinese tree shrew): 102477711
Entry
102477711         CDS       T02978                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain
  KO
K06752  MHC class II antigen
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup04145  Phagosome
tup04514  Cell adhesion molecule (CAM) interaction
tup04612  Antigen processing and presentation
tup04640  Hematopoietic cell lineage
tup04658  Th1 and Th2 cell differentiation
tup04659  Th17 cell differentiation
tup04672  Intestinal immune network for IgA production
tup04940  Type I diabetes mellitus
tup05140  Leishmaniasis
tup05145  Toxoplasmosis
tup05150  Staphylococcus aureus infection
tup05152  Tuberculosis
tup05164  Influenza A
tup05166  Human T-cell leukemia virus 1 infection
tup05168  Herpes simplex virus 1 infection
tup05169  Epstein-Barr virus infection
tup05310  Asthma
tup05320  Autoimmune thyroid disease
tup05321  Inflammatory bowel disease
tup05322  Systemic lupus erythematosus
tup05323  Rheumatoid arthritis
tup05330  Allograft rejection
tup05332  Graft-versus-host disease
tup05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:tup00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    102477711
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102477711
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    102477711
   04612 Antigen processing and presentation
    102477711
   04658 Th1 and Th2 cell differentiation
    102477711
   04659 Th17 cell differentiation
    102477711
   04672 Intestinal immune network for IgA production
    102477711
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102477711
   05164 Influenza A
    102477711
   05168 Herpes simplex virus 1 infection
    102477711
   05169 Epstein-Barr virus infection
    102477711
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    102477711
   05152 Tuberculosis
    102477711
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    102477711
   05140 Leishmaniasis
    102477711
  09163 Immune disease
   05310 Asthma
    102477711
   05322 Systemic lupus erythematosus
    102477711
   05323 Rheumatoid arthritis
    102477711
   05320 Autoimmune thyroid disease
    102477711
   05321 Inflammatory bowel disease
    102477711
   05330 Allograft rejection
    102477711
   05332 Graft-versus-host disease
    102477711
  09166 Cardiovascular disease
   05416 Viral myocarditis
    102477711
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102477711
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tup04147]
    102477711
Exosome [BR:tup04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102477711
  Exosomal proteins of epithelial cells
   102477711
  Exosomal proteins of breast milk
   102477711
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 102477711
NCBI-ProteinID: XP_006165999
LinkDB
Position
Un
AA seq 260 aa
MRAPKRMFQTKAVILSALSLAYLLSLQGAGAIKADHVSIYLVLAQSHRPSGECMFQFDGD
EVFYVDLDKKETIWHMEEFGHAFSYEAQDGLKNLAVAKENLIIMIRRSNHTQASNEPPEV
TVFPKKSVELGQPNVLICHVDKFFPPVLNVTWLRNGQPVTDGVTESLFLPSTEFRFHKFL
YLTFVPSAEDVYDCRVEHWGLEEPLLMHWEAQESILVPETTETVVCALGLVLGLVGIIVS
TVFIIKDLHSSRNPWVQGPL
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcgtgccccaaagagaatgttccagaccaaagctgtcatactgagtgccctctccttg
gcttacttgctgagtcttcagggagctggggccatcaaggcagatcacgtgtcaatttat
ttagtattagcacaatctcatagaccttcaggggagtgtatgttccagtttgatggggat
gaggtgttttatgtggatttggacaagaaggagacaatctggcatatggaggagtttggc
cacgccttttcctatgaggctcaagatgggctgaagaaccttgccgtagcaaaggaaaac
ctgattatcatgatacggcgttccaaccacacccaggcctccaacgagcctcctgaggtg
actgtgtttccaaagaagtctgtggagctgggccagcccaacgtcctcatctgccacgtg
gacaagtttttccctccggtgctcaatgtgacatggctgcgcaatggacagccggtcact
gacggtgtcaccgagagcctttttctgccaagcacagagttcagattccacaagttcctg
tacctgacctttgtgccctcagctgaggacgtctatgactgcagggtggagcactggggc
ctggaagagccactcctcatgcattgggaggcccaggagtccatcctggtgcctgagacg
acagagactgtggtctgtgccctgggcctggtgctgggcctggtgggcatcatcgttagc
accgtcttcatcataaaggacctgcattccagtcgcaacccctgggttcaggggcccctg
tga

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