Tupaia chinensis (Chinese tree shrew): 102482652 Help Entry 102482652         CDS       T02978                                  Symbol TRAF6 Name (RefSeq) TNF receptor associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04010   MAPK signaling pathway tup04064   NF-kappa B signaling pathway tup04120   Ubiquitin mediated proteolysis tup04140   Autophagy - animal tup04144   Endocytosis tup04380   Osteoclast differentiation tup04620   Toll-like receptor signaling pathway tup04621   NOD-like receptor signaling pathway tup04622   RIG-I-like receptor signaling pathway tup04657   IL-17 signaling pathway tup04722   Neurotrophin signaling pathway tup04936   Alcoholic liver disease tup05132   Salmonella infection tup05133   Pertussis tup05135   Yersinia infection tup05140   Leishmaniasis tup05142   Chagas disease tup05145   Toxoplasmosis tup05152   Tuberculosis tup05160   Hepatitis C tup05161   Hepatitis B tup05162   Measles tup05168   Herpes simplex virus 1 infection tup05169   Epstein-Barr virus infection tup05170   Human immunodeficiency virus 1 infection tup05171   Coronavirus disease - COVID-19 tup05200   Pathways in cancer tup05222   Small cell lung cancer tup05235   PD-L1 expression and PD-1 checkpoint pathway in cancer tup05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102482652 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     102482652 (TRAF6)    04064 NF-kappa B signaling pathway     102482652 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     102482652 (TRAF6)    04140 Autophagy - animal     102482652 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     102482652 (TRAF6)    04621 NOD-like receptor signaling pathway     102482652 (TRAF6)    04622 RIG-I-like receptor signaling pathway     102482652 (TRAF6)    04657 IL-17 signaling pathway     102482652 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     102482652 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     102482652 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102482652 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     102482652 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     102482652 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     102482652 (TRAF6)    05161 Hepatitis B     102482652 (TRAF6)    05160 Hepatitis C     102482652 (TRAF6)    05171 Coronavirus disease - COVID-19     102482652 (TRAF6)    05162 Measles     102482652 (TRAF6)    05168 Herpes simplex virus 1 infection     102482652 (TRAF6)    05169 Epstein-Barr virus infection     102482652 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     102482652 (TRAF6)    05135 Yersinia infection     102482652 (TRAF6)    05133 Pertussis     102482652 (TRAF6)    05152 Tuberculosis     102482652 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     102482652 (TRAF6)    05140 Leishmaniasis     102482652 (TRAF6)    05142 Chagas disease     102482652 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     102482652 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     102482652 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102482652 (TRAF6)    04121 Ubiquitin system [BR:tup04121]     102482652 (TRAF6) Enzymes [BR:tup01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102482652 (TRAF6) Membrane trafficking [BR:tup04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     102482652 (TRAF6) Ubiquitin system [BR:tup04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     102482652 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF MATH_2 TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING zf-RING_11 RING_XB3-XBAT31 U-box DUF4455 Sina_ZnF Spc29 DUF3450 DUF16 Med21 Myosin_tail_1 DUF7310 ATG16 EzrA DUF7607 UPF0242 TMF_DNA_bd DUF1664 Motif Other DBs NCBI-GeneID:  102482652 NCBI-ProteinID:  XP_014438379 LinkDB All DBs Position Un AA seq 502 aa AA seqDB search MSLLHCENSCGSSQPGSDCCAAMASSCSMTAKDDSVSGTASTGNLSSSFMEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLESQLFPD NFAKREILSLMVKCPNAGCLHKMELRHLEDHQIHCEFALISCPQCQRPFQKCQLDIHILK DCPRRQVACTNCAELMAFEEKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLALTSIPQPDLLPYDSASQ PRVSCSCHPEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSDLKRTIRTLEDKV AEIEAQQCNGIYVWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTILLTILDQSEAPVRQNHEEIMDAKSELLAFQR PTIPRNPKGSYRGKFLQSKIKR NT seq 1509 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacactgtgaaaacagctgtgggtccagccagcctgggagcgactgctgt gctgccatggccagctcctgcagcatgacagccaaggacgacagtgtgagcgggactgcc agcacagggaacctctccagctctttcatggaagagacccagggctatgacgtggagttt gacccgcccctggagagcaagtatgagtgccccatttgcttgatggcattgcgggaagca gtgcagaccccatgtggccacaggttctgcaaagcctgcatcatcaaatccataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaagccaactgtttcctgac aattttgcaaaacgagagattctttctctaatggtgaagtgtccaaatgcaggttgtttg cacaagatggaactgaggcatcttgaggatcatcaaatacattgtgaatttgctcttata agctgtcctcaatgccagcgccccttccagaaatgccaactggatattcacattctcaag gattgtccacggaggcaggttgcatgtacaaattgcgctgaattgatggcatttgaagaa aaagagatccatgaccagaactgtcctttggcaaacgtcatctgtgaatactgcaatacc atgcttatcagagaacagatgcctaatcattatgatttagattgccctacggccccaatt ccatgcactttcagcacttttggttgccacgaaaagatgcagaggaaccacttggcacga cacctgcaagagaatacgcagtcgcacatgagaatgctggcccaggctgttcacagtttg agccttgccctgacttccatccctcagcctgatctgctcccatacgattctgcctcccag ccccgggtttcctgttcgtgtcacccagaggtccagaatttccaggaaactattcagcag ttagagggtcgccttgtaagacaagaccatcagatccgggaactgactgctaagatggaa actcagagtatgtatgtaagcgatctcaaacgaactattcgaacccttgaggacaaagtc gctgaaattgaagcacagcagtgcaatgggatttatgtctggaagattggcaactttggg atgcacttgaagtctcaggaagaggagaaacctgtcgtcatccatagccctggattctac acaggcaaacccgggtacaaactgtgcatgcgcttgcacctgcagttacccacggcccag cgctgtgcgaactacatatctctctttgtccacacaatgcaaggagagtatgacagccac ctcccttggcccttccagggaacaatactccttaccatcctggatcagtccgaagcacct gtaaggcaaaaccatgaagaaataatggatgccaaatcggagctgcttgccttccagcga cccacaatcccacggaacccaaaagggtcctaccgtggcaagtttttacagagtaaaata aagagataa

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