Tupaia chinensis (Chinese tree shrew): 102484417 Help Entry 102484417         CDS       T02978                                  Symbol LDLR Name (RefSeq) low density lipoprotein receptor   KO K12473   low-density lipoprotein receptor Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup03272   Virion - Hepatitis viruses tup04144   Endocytosis tup04913   Ovarian steroidogenesis tup04925   Aldosterone synthesis and secretion tup04927   Cortisol synthesis and secretion tup04934   Cushing syndrome tup04976   Bile secretion tup04979   Cholesterol metabolism tup05145   Toxoplasmosis tup05160   Hepatitis C tup05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03272 Virion - Hepatitis viruses     102484417 (LDLR)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     102484417 (LDLR)  09150 Organismal Systems   09152 Endocrine system    04913 Ovarian steroidogenesis     102484417 (LDLR)    04925 Aldosterone synthesis and secretion     102484417 (LDLR)    04927 Cortisol synthesis and secretion     102484417 (LDLR)   09154 Digestive system    04976 Bile secretion     102484417 (LDLR)    04979 Cholesterol metabolism     102484417 (LDLR)  09160 Human Diseases   09172 Infectious disease: viral    05160 Hepatitis C     102484417 (LDLR)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     102484417 (LDLR)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     102484417 (LDLR)   09167 Endocrine and metabolic disease    04934 Cushing syndrome     102484417 (LDLR)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102484417 (LDLR) Membrane trafficking [BR:tup04131]  Endocytosis   Clathrin-mediated endocytosis    Low-density lipoprotein receptor (LDLR) family proteins     102484417 (LDLR) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF SGL EGF_CA Vgb_lyase EGF hEGF EGF_3 Motif Other DBs NCBI-GeneID:  102484417 NCBI-ProteinID:  XP_006161583 LinkDB All DBs Position Un AA seq 887 aa AA seqDB search MLQMTRARVQSLPGRTKPGLPSRTLRVVVGVGTLQAGTASMRRANWGLCWAIALLLAAAG AAEYKCERNEFQCRDGKCISYKWVCDGLPECQDGSDESQETCRSVTCKAGDFSCGGRVNR CIPQSWRCDSQVDCENGSDEQGCAPRTCSQDEFRCHDGNCISRQFVCDSDRDCLDGSDEA ACQTPTCGPSDFRCNSSTCIPALWACDGEPECEDGSDEWPQNCQGRNTSSPRADLSPCSA LEFHCGSGECIHSSWRCDNDPDCKDKSDEDGCNTATCRPDEFQCSDGTCIHGSRQCDREY DCKDMSDELGCVNVTRCEGPNKFKCHSGECITLDKVCNAVRDCRDWSDEPLKECGTNECL DNNGGCSHVCNDLKIGHECLCPDGFRLVDQRKCEDIDECQEPDTCSQLCVNLEGSFKCEC DEGFQLDLLTKTCKSVGPIAYLLFTNRHEVRKMTLDRREYASLIPNLKNVVALDTEVARN RIYWSDLSQRKIYSTQLDGAHSFSSYDTVISGDLQAPDGLAVDWIHGNIYWTDSILGTVS VADTKGVKRKTLFKERGSKPRAIAVDPVHGFMYWTDWGTPAKIEKGGLNGVDVYSLVTED IQWPNGITLDLSNGRLYWVDSKLHSISSIDVNGGNRKTVLEDKKSLAHPFSLAIFEDKVF WTDILNEAIFSANRLTGSDVHLLVENLHSPEDLVLFHNLTQPRGVNWCERTTLPXCQYLC LPAPQINPHSPKFTCACPDGSSLAKDMRSCRTDAEPIVTATAMKPKHTASRPTASTTRRP GALPDLSTAETVTMSHHVMGDVASRGNEEKPRSAGVLSIVLPIALLALLCFGAFLLWKSW RLKNINSINFDNPVYQKTTEDEVHICQNQDGYTYPSRQMVNLEDDVA NT seq 2664 nt NT seq  +upstreamnt  +downstreamnt atgctgcaaatgactcgggcccgcgtgcagtcgctgccgggtcgcacgaagcccgggttg ccatcgcggacgctgcgggtcgtggtcggggtcgggacgttgcaggcggggactgcgagc atgagacgagccaactggggactgtgctgggccatcgccctgcttctcgctgcggcgggg gctgcagagtacaaatgtgaaagaaacgagttccagtgccgagacgggaagtgcatctct tacaagtgggtttgcgatggcctccccgagtgccaggacggctccgatgagtctcaggag acctgcaggtctgtcacctgcaaagcgggagacttcagctgtgggggccgtgtcaaccgc tgcattccgcagtcctggagatgcgacagccaagtggactgtgagaacggctccgacgag caaggctgtgcccccaggacgtgctcccaggacgagttccgctgccacgacgggaactgc atctctcggcagttcgtctgcgactccgaccgggactgcctggacggctcggacgaggcc gcctgccagacgcccacctgcggcccctctgacttccgctgcaacagctccacctgcatc cccgcgctgtgggcctgcgacggcgagcctgagtgcgaggacggctcagacgagtggccc cagaactgccagggccgtaacacgtcctccccccgggctgacctcagcccctgctccgcc ctcgagttccactgcggaagcggcgagtgcatccactccagctggcgctgtgacaacgac cccgactgcaaggacaagtccgacgaggacggctgcaacacagccacctgccgccccgac gaattccagtgctcggacgggacctgtatccacggcagccggcagtgtgaccgcgagtac gactgcaaggacatgagtgacgaactgggctgcgtcaacgtgacgcggtgcgaggggccc aacaagttcaaatgccacagcggcgagtgcatcacactggacaaagtgtgcaacgcggtc cgggactgccgggactggtcggacgagcccctgaaggagtgcgggaccaacgagtgcttg gacaacaacggaggctgctcccatgtctgcaacgacctcaagattggccacgagtgcttg tgccccgacggcttcaggctggtggaccagcggaaatgtgaagatattgatgaatgccag gagcccgacacctgcagccagctctgtgtgaacctggagggcagcttcaagtgcgaatgc gacgagggcttccagctggacctgctcaccaagacctgcaaatctgtgggccccatcgca tacctcttgttcaccaaccgccacgaggtgaggaagatgacgctggaccgccgtgagtac gccagcctcatccccaacctgaaaaacgtggtggcgctggacacggaggtggcccgcaac aggatctactggtctgacctgtcacagaggaagatctacagcacccagctcgacggagcc cacagcttctcctcctacgacacggtcatcagcggagacctgcaggcccccgacgggctg gctgtggactggatccacggcaacatatactggacggactccatcctgggcaccgtctct gtggccgacaccaagggcgtgaagaggaagacgctgttcaaggagcgcggctccaagccg agggccatcgcggtggatcccgttcacggcttcatgtactggacagactgggggactccc gccaagattgagaaaggggggctgaatggtgtggacgtctactcgctggtgacagaagac atccagtggcccaacggcatcaccctggatctttccaatggccgcctctactgggtcgac tccaaactccactccatctccagcatcgatgtgaatgggggcaaccggaagactgtcttg gaggacaagaagagcctggcgcaccccttctccctggccatcttcgaggacaaagtgttt tggacagacatcctgaacgaagccatcttcagtgccaatcgcctcacgggctcggatgtt cacttgctggtggaaaacctgcactccccggaagacttggtcctcttccacaacctcacg cagccgagaggcgtgaactggtgtgagaggacaacgctgcccncctgccagtacctgtgc ctcccggccccgcagatcaacccccactcacccaagttcacctgcgcctgcccggatggc tcgtctctggccaaggacatgaggagctgccgcacagacgcagagcccatagtgaccgcc acagccatgaagccaaagcacacagccagtcggcccacagccagcaccacccggcggccc ggtgccctcccagacctcagcacagcagagacggtcaccatgtcccaccacgtcatgggt gacgtcgccagcagaggaaatgaggagaagccaaggagcgcgggggttctgtccatcgtc ctccccatcgccctcctggccctcctctgcttcggagccttcctcctctggaagagctgg cggctgaaaaacatcaacagcatcaacttcgacaaccccgtgtaccagaagaccacggaa gacgaggtccacatttgccagaaccaggacggctacacctacccctcgagacagatggtg aacctggaggatgacgtggcctga

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