Tupaia chinensis (Chinese tree shrew): 102486589
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Entry
102486589 CDS
T02978
Symbol
APOBEC3F
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3F
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03250
Viral life cycle - HIV-1
tup05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102486589 (APOBEC3F)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102486589 (APOBEC3F)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102486589 (APOBEC3F)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102486589 (APOBEC3F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
DUF7136
TMEM87A-B_GOLD
Motif
Other DBs
NCBI-GeneID:
102486589
NCBI-ProteinID:
XP_006150838
LinkDB
All DBs
Position
Un
AA seq
380 aa
AA seq
DB search
MFLLDCLGTGSLWRDHERLHVKANSCPTEVTYRGPVTELCIQRVQRKSTCGGLGAEHLHL
HLLGWVWSSYHAESHFLLWFQKNFLSLDKDFQVTWYLSWSPCPACAKQVADFLAVHRNVS
LTIFSARLYYFWDPEFRDGLHRLFEKGARVAIMSPKDFENCWEGFVFNEGRDFRPWDNMV
ENYQSLRITLQEILRYPMERLFRKTFYFHFQNRLYASRRNTTFLCYRVDREERPGTVSLA
RGVWRNQVHPTCHAELRFLSWFQSNMLCPNKDFQVTWYLSWSPCPNCAKQVADFLAAHRN
VSLTILTARLYYFWDQKFRNGLRRLCEEGARVAIMSPQDFKNCWEDFVWNKGWNFTPRFN
VGRNYQLLASRLEEILGPHS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgctggactgtctgggcaccggatccctttggagggatcatgaaaggcttcat
gtaaaagccaattcctgccccaccgaggtcacttaccgtggccccgtcaccgagctttgc
atccagcgagtccagagaaagagcacctgtggagggctgggggccgagcacctgcacctg
cacctgctgggctgggtctggtcttcctaccatgcagaatctcactttctcttgtggttc
caaaaaaacttcctgtcccttgacaaggacttccaggtcacctggtacttgtcctggagc
ccctgccctgcatgtgcaaagcaggtggccgacttcctggccgtgcaccgaaacgtgagc
ctgaccatcttctccgcccgactctactacttctgggacccagaattcagggatgggctt
cacagactgtttgagaaaggggcccgggtggccatcatgtcccccaaagattttgaaaac
tgctgggaaggctttgtgttcaacgagggaagggacttcaggccttgggacaacatggtt
gaaaattatcagtccctgcgcatcaccctgcaggagatcctcagatacccgatggagcgg
ttattccggaagacattttactttcactttcaaaaccgactctatgcctcgcgtcggaac
accaccttcctgtgctaccgagtggacagagaggagcggccgggcaccgtgtccctggcc
aggggcgtctggagaaaccaggtgcatcctacctgccacgcagaattgcgctttctctcg
tggttccagagtaacatgctgtgccccaacaaggactttcaggtcacctggtacttgtcc
tggagcccctgccctaactgtgcaaaacaggtggccgacttcctggccgcgcaccggaac
gtgagcctgaccatcctcaccgcccgactctactacttctgggaccaaaaattcaggaat
gggcttcgcagactctgtgaggaaggggcccgggtggcaatcatgtccccccaagatttt
aaaaactgctgggaagactttgtgtggaacaagggatggaacttcacgcctcggtttaat
gtgggtagaaattaccagctcctggccagcaggctggaggagatccttggtcctcactct
tga
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