Tupaia chinensis (Chinese tree shrew): 102491621
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Entry
102491621 CDS
T02978
Symbol
EFTUD2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102491621 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tup03041
]
102491621 (EFTUD2)
Spliceosome [BR:
tup03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102491621 (EFTUD2)
Complex C
U5 SnRNP specific factors
102491621 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
102491621
NCBI-ProteinID:
XP_006170054
LinkDB
All DBs
Position
Un
AA seq
979 aa
AA seq
DB search
MARCLRIMDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHP
GMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTV
YEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFT
EQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAE
GVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYS
TDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKT
RKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIR
PLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGP
LMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWIS
VARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVE
PVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDI
KVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKK
LGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWG
TREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYF
VEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQG
QAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFF
DDPMLLELAKQDVVLNYPM
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggtgccttcgcatcatggatactgacttatatgatgagtttgggaattatatt
ggaccagagcttgattctgatgaagatgatgatgaactgggcagagaaacgaaagacctt
gatgagatggatgatgacgacgatgacgatgacataggagatcatgacgatgatcatcct
gggatggaggtggtgctgcatgaggacaaaaagtactacccaacagctgaggaggtctat
ggtcctgaggtggagaccattgttcaggaggaagacacccagcctctcactgaacccatt
attaagccagtgaaaacgaagaagttcactctgatggagcagacgttacctgtcacagtg
tatgaaatggatttcttggcggatctgatggataactcggagctcatcagaaatgtgacc
ctttgtggccatctccaccatggcaagacatgttttgtggattgcttaatagagcagacg
catccggaaatcagaaagcgctatgaccaagatctgtgctatactgatatcctcttcaca
gagcaagagagaggtgttggcatcaaaagcactcctgtgacagtggtcttgccggatacc
aaaggaaaatcttatctcttcaatatcatggacacaccaggacatgtgaatttttcagat
gaagtcacagctggcttgcgcatctcagatggagtggtccttttcatcgatgctgcagag
ggggtgatgctgaacacagagcggctgatcaagcatgcagtgcaggagaggctggcggtc
accgtgtgcatcaacaagattgaccggctgatcctggagctgaaactgcctccaactgac
gcctattacaagctgcgccacattgtggatgaggtcaatggattgataagcatgtattcc
actgatgagaacctgatcctttccccgctcctgggcaacgtctgtttctccagctcccag
tacagcatctgcttcactctgggctcctttgccaagatctatgccgacacctttggtgac
attaattaccaggaatttgctaaaagactctggggtgacatctacttcaaccctaagacg
cgaaaattcaccaaaaaggccccgaccagcagttcccagaggagctttgtggagtttata
ttggagcctctttataagatccttgctcaggttgtgggtgatgtggacaccagtctcccg
aggaccctggatgagcttggcatccacctgaccaaggaggagctgaagctgaacatccgt
cccctgctcaggctggtctgcaaaaagttctttggcgagttcacaggctttgtggacatg
tgtgtccagcacatcccctctcctaaggtgggcgccaagcccaagattgagcatacctac
accggtggtgtggactccgaccttggcgaggccatgagcgactgtgaccctgatggtccc
ctgatgtgccacaccactaagatgtacagcacagatgacggagttcagtttcatgccttc
ggccgggtgctaagcggcaccatccatgctgggcagcccgtgaaggtactgggggagaac
tacactctggaggatgaggaagactcccagatatgtaccgtgggccgcctttggatctcc
gtggccaggtaccacattgaggtgaaccgtgttcctgctggcaactgggttctgatcgaa
ggtgttgatcaaccaattgtgaagacagcaaccataactgaaccccgaggcaatgaggag
gctcagattttccggcccttgaagttcaataccacatctgtcatcaagattgctgtggag
ccagtcaatccctcagagctgcccaagatgcttgacggcctgcgcaaggtcaacaagagc
tatccatccctcaccaccaaggtggaagagtctggtgagcatgtgatcctgggcaccggg
gagctgtacctggactgcgtgatgcatgatttgcggaagatgtactcagagatagacatc
aaggtggctgacccagttgtcacgttttgtgagaccgtggtggaaacgtcctccctcaag
tgctttgctgaaacacccaataagaagaacaagatcaccatgattgctgagccccttgag
aagggccttgctgaggacatagaaaacgaggtagtccagatcacatggaacaggaagaag
ctgggagagttcttccagaccaagtacgattgggatctgctggctgcccgttccatctgg
gcttttggcccagatgccactggccccaacattctagtggacgatactctgccctctgag
gtggacaaggctcttctcggctcagtgaaggacagcatcgttcaaggtttccagtggggc
accagggaggggcccctctgtgatgagttgattcggaatgtcaagtttaagattctggat
gcagtggttgcccaggagcccctgcaccggggtgggggccaaatcatccctacagccagg
agagttgtctattctgctttcctcatggccactcctcgtctgatggagccttactacttt
gtagaggtccaggcccctgcagattgtgtctctgctgtttataccgtcctggccaggcgc
agggggcatgtgactcaagatgcacccatcccaggttctcctctctacaccatcaaagct
ttcatcccagccattgactcgtttggctttgaaactgatctccggactcatacccaggga
caagccttttccctgtctgtcttccaccattggcagattgtacctggtgatcctctagac
aagagcattgtcattcgccccttggagccacagccagctccccacctggcccgagaattc
atgatcaaaacccgtcgtaggaagggcctgagtgaagacgtgagcatcagcaagttcttc
gacgatcctatgttgctggagctcgccaagcaggatgttgtcctcaattacccgatgtga
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