Tupaia chinensis (Chinese tree shrew): 102497398
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Entry
102497398 CDS
T02978
Symbol
HPS6
Name
(RefSeq) HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102497398 (HPS6)
Membrane trafficking [BR:
tup04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
102497398 (HPS6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
102497398
NCBI-ProteinID:
XP_006172275
LinkDB
All DBs
Position
Un
AA seq
723 aa
AA seq
DB search
APGEELERAWPAGQPSPLDAFFLPWPAQPALVLVWESGLAEVWCAGVGPGWRLLQSIELC
PCGEARVVAVAAPRGRLVWCEERQAGAEDRLGPRAALFSHCVCVRTLELSGEAGTNVGRT
HVLLHHCPPFGLLTSRKELFLVPTATTWPGVAHILLIWSPGKGKVIVAAPCLGLSHRKNL
NPGRGDTWDFRILLRGLSGLLSPREPWTVHTWAPTAQGLLLLDFRGTVSLVQPHGGTRAV
GTLQEAPVGQRMSAALGTFQGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLDPPAP
GMEDEELETGRGLRLLSALGLFCVGWKVSQGLELPSPTDLVFEEACGYYQRRSLRGAQLT
PEELKHNSTFRAPQALASLLQGHVPPPALLTTLRAELRDYRGLEQLKAQLVAGDDEEAGW
TELAEHEVARLLRTELTGDQLVQLNSVFQALPTAAWGATLLALQLQPDGNGRLSSQAPPD
VWKKVLRGTSAGKEPPNGMLPPFELLCQCXXXXXPPFVELAQQQGGPGWGAGGPGLPLYR
RALAVLGEEGSRPEALELELLLGSGRPKAVLQAVRQLVQKEQWERALEAGLALGPSSPLL
RSEIFKLMLGEFARHRHLDAYLPLLSRLCPPELAPAELLLLLRAHLPDEVGSPAPFPEPG
AEPPLTVGLLRALLEQTGAQGRCSGPALGRYEDILWDSGTPPPTPPRGPTTALQTSDRSG
LEV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gcacccggcgaggagcttgagcgggcctggccggctggccagccctccccgctagacgcc
ttctttctgccttggccagcgcaacccgccctggtcctggtttgggagagtggcctagcc
gaggtgtggtgcgcaggggtggggcctgggtggaggctgctgcagagcatcgagctgtgt
ccctgcggtgaagcccgtgtggtggcagtggcggcgccccgaggccgcttggtttggtgc
gaggagcgtcaggccggtgctgaggaccggctagggccacgcgcagccttgttcagccac
tgcgtgtgcgtccgcactctcgagctcagcggagaggcaggcacgaatgtgggccgcacg
catgtcctgctgcaccactgccctcccttcggactgctgacctcccgcaaggaactcttc
ctggtgcccacagccactacctggcctggtgtggcccacatcctgctcatctggagcccg
ggtaaaggcaaggtgattgtggctgccccctgtcttggcctctcccaccgtaaaaacctg
aatcccggacgaggggacacgtgggacttccggatcctactccgaggcctttctgggttg
ttgtcccccagggagccgtggactgtccatacctgggccccaactgcccagggcctgcta
ttgctcgacttcaggggcactgtgagcctagtacagccccacggcggaacccgggcggtt
ggtacgctgcaggaggctcctgtcggccagagaatgtctgcagccctgggaacatttcag
ggcactctggcctgtgtgctgggctccaccttggaactgctggacatgggcagtgggcag
ctgctggagaggaaggtcctaagtaccgacagagtacatttgctggaccccccagcccct
ggcatggaggatgaagagctagagaccggaaggggtctccgtttgctttcagccttgggt
ctgttttgtgtgggctggaaagtctcccaaggcctggagctgccttcacccacagacctg
gtgtttgaggaggcctgtgggtactaccagcggcgaagcctgcggggtgcccagctcacc
ccagaggaactgaagcacaacagcacgttccgggccccgcaggccctggcctccctcctc
cagggccacgtgcccccgcctgcactgttgaccacactgagggccgaacttcgggattac
cggggcttagagcaactcaaggcccaactggtggctggggatgatgaggaggctggctgg
accgagctggcagagcacgaagtggcacgcttgctcaggaccgagttgacaggagaccag
ctggtccagctcaacagtgttttccaagctcttcctacggcagcctggggtgccaccctc
ctggccctgcagctgcagccagatggaaatggcaggctaagttcccaagcgccccctgat
gtgtggaagaaggtgctcaggggtacatcggctggaaaggagccccccaatgggatgctg
cccccctttgaactcctgtgccagtgcncnnnnnnnnnnntgccaccctttgtggaactg
gcccagcagcagggcgggccgggctggggggctgggggcccagggctgcccctgtatcgc
agagccctggcagtgctaggggaggagggatccaggcctgaggcactggagctagagctg
ctcttgggcagcgggcggcccaaagctgtgctccaagccgtgaggcagctggtgcaaaag
gaacagtgggaacgggccctagaggccggcctggccctcggcccctccagccccctgctt
cgaagtgagattttcaaactgatgctgggcgagtttgcccggcaccgccatcttgatgcg
tacctccccctcctttcccgcctgtgcccaccagaactggctccagctgagctcctgctt
ctactgcgggcacatctcccagatgaggtggggtcccccgccccattccctgagcctggg
gctgagccccctctcactgtgggcttgctcagagccctgctggaacagactggggctcaa
ggacggtgctcaggcccagcgctaggccggtatgaggacatcctatgggactccggcact
ccaccccccacgccacctcgggggcctacgactgccctccagacatcagaccgctcaggc
ctggaggtctga
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