Tupaia chinensis (Chinese tree shrew): 102497602 Help Entry 102497602         CDS       T02978                                  Symbol THBS1 Name (RefSeq) thrombospondin 1   KO K16857   thrombospondin 1 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04015   Rap1 signaling pathway tup04115   p53 signaling pathway tup04145   Phagosome tup04148   Efferocytosis tup04151   PI3K-Akt signaling pathway tup04350   TGF-beta signaling pathway tup04510   Focal adhesion tup04512   ECM-receptor interaction tup04820   Cytoskeleton in muscle cells tup05144   Malaria tup05165   Human papillomavirus infection tup05205   Proteoglycans in cancer tup05206   MicroRNAs in cancer tup05219   Bladder cancer Brite KEGG Orthology (KO) [BR:tup00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     102497602 (THBS1)    04350 TGF-beta signaling pathway     102497602 (THBS1)    04151 PI3K-Akt signaling pathway     102497602 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102497602 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102497602 (THBS1)    04148 Efferocytosis     102497602 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102497602 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102497602 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102497602 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     102497602 (THBS1)    05205 Proteoglycans in cancer     102497602 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     102497602 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102497602 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     102497602 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102497602 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tup00536]     102497602 (THBS1) Membrane trafficking [BR:tup04131]  Endocytosis   Phagocytosis    Opsonins     102497602 (THBS1) Glycosaminoglycan binding proteins [BR:tup00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102497602 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  102497602 NCBI-ProteinID:  XP_014447147 LinkDB All DBs Position Un AA seq 1177 aa AA seqDB search MGLAWALGVLLLLHVCGTNRIPESGGDNSVFDIFELIGAARRGSGRRLVKGLDTSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLFLASLRQMKKTRGTLLALERKDHSGQVFSVV SNGKAATLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLANIARLRIAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSNMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACKKDACPINGGWGPWSLWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDMSENQI CNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCRDVDECKEVPDACF NHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDX XXXXXXXXXXPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDIS ETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atgggattggcctgggctctcggagtcctgctcctgctgcatgtgtgtggcaccaaccgc attccagagtccgggggagacaacagcgtgtttgacattttcgagctcattggggctgcc cgcagaggctctggtcgccgactagtgaagggcctggacacttccagcccagcatttcgc attgaggatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat gctgtgcgtgcagagaaaggtttcctcttcctggcttccctgaggcagatgaagaagacc cgaggcacactgctggccctggagcggaaagaccactccggccaggtcttcagcgtggtc tccaatggcaaggcggccaccctggacctgagtctgaccgtgcaggggaagcagcatgtg gtgtcggtggaagaagctctcttggccaccggccagtggaagagcatcacgctgttcgtg caggaagacagggcccagctgtacatcgactgtgagaagatggagaatgctgagctggat gtccctatccaaagcatcttcaccagggacctggccaacatcgccagactccgcatcgca aaaggagacgtcaatgacaatttccagggggtgctgcagaatgtgaggtttgtctttgga accacaccagaagacatactcaggaacaaaggctgctccagctctaccaatgtccttctc accctcgacaacaacgtggtgaacggttccagccctgccatccgcaccaactacatcggc cacaagacaaaggatctgcaagccatctgtggcatctcctgtgatgagctgtccaacatg gtgctggaactcaggggcctgcgcaccatcgtgaccacactgcaggacagcatccgcaaa gtgactgaagagaacaaagagctggccaatgagctgaggaggcctcccctctgctatcac aacggcgttcagtacaggaataacgaagaatggactgttgatagctgcactgagtgtcgc tgtcagaactcagtcaccatctgcaaaaaggtatcctgccccattatgccctgctccaat gccacagttcctgatggagaatgctgcccacgttgttggcctagcgactctgcagatgat ggctggtctccgtggtctgagtggacctcctgttctgtgacatgtgggaatggaattcag cagcgtggccgctcctgcgatagcctcaacaaccgatgtgagggctcctcggtgcagacg cggacctgccacattcaggagtgtgacaagagatttaaacaggatggcggctggagccac tggtccccgtggtcatcttgttctgtgacctgtggtgatggcgtgatcaccaggatccgg ctctgcaactctcccagcccccagatgaatgggaaaccatgtgaaggcgaagctcgagag accaaggcctgcaagaaagatgcctgccccatcaatggaggctggggtccctggtcactg tgggacatctgttctgtcacctgcggaggaggggtgcagaaacgtagccgactctgcaac aaccccacaccccagtttgggggcaaggactgcatcggcgatatgtcagaaaaccagatc tgcaacaagcaagactgtccaatcgatggatgcctgtccaatccctgcttcgccggtgcc aagtgtactagctaccctgatggcagctggaagtgcggtgcctgtccccctggatacagt ggaaatggcatccaatgcagagatgttgatgagtgcaaagaagtgcccgatgcctgcttc aaccacaatggagagcacaggtgtaagaacacagaccccggctacaactgcctgccctgc ccaccacgtttcacgggctcacagcccttcggcaggggcgtcgaacatgccacagccaac aaacaggtgtgcaaaccccgcaacccttgcacagatgggacccacgactgcaataagaac gccaagtgcaactacctgggccactacagtgaccccatgtaccgctgcgagtgcaagcct ggctacgctggcaatggcatcatctgcggggaggacacggaccttgatggctggcccaat gagaacctagtttgtgtggccaatgcaacctaccactgcaaaaaggataattgccccaac cttcccaactcggggcaggaagactatgacaaggatggaatcggcgatgcctgtgacgac gatgatgacaatgataaaattccagacgatcgggacaactgtccattccattacaaccca gcccagtacgactatgacagagatgacgtgggagaccgctgtgacaactgcccctacaac cacaacccagaccaggcggacacagacaacaatggggaaggagacgcctgtgctgcagac attgacggagacggtatcctcaacgaacgagacaactgccagtatgtctacaacgtggac cagagggacaccgatatggatggggttggagatcagtgtgacaactgccccctggaacac aatccagatcagctggactctgattcggaccgcattggagacacttgtgacaacaatcag gatattgatgaagatggccaccagaacaatctcgacaactgtccctatgtgcccaatgcc aaccaggctgaccatgacaaagacggcaagggagatgcctgtgaccatgatgatgacaan nnnnnnnnnnnnnnnnnnnnnnnnnnnnntcctgatgacagggataactgcagactcgtg cccaatcctgaccagaaggattctgatggtgatggtcgaggtgatgcttgcaaagatgat tttgaccatgacagtgtgccagacattgatgacatctgtcctgagaatgtcgatatcagt gagactgacttccgccggttccaaatgattcctctagatcccaaagggacatcccaaaat gaccctaactgggttgtacgccatcagggtaaagaactcgtccagactgtcaactgtgat cctggacttgcagtaggttatgatgagtttaatgctgtggacttcagtggcaccttcttc atcaacactgaaagagacgatgactatgccgggtttgtgtttggctaccaatccagcagc cgcttctacgttgtgatgtggaagcaagtcacccagtcctactgggacaccaaccccaca agggctcagggatactcaggactttctgtgaaagttgtgaactccaccacagggccgggc gagcatctgcggaatgccctgtggcacacaggaaacaccccaggccaggtgcgcaccttg tggcatgatccccgtcacataggctggaaagatttcactgcctacagatggcgtctcagc cacaggccaaagacaggcttcattagagtggtgatgtatgaagggaagaaaatcatggct gactcaggacccatctatgacaaaacctatgctggtggtaggctaggactgtttgtcttc tctcaagaaatggtgttcttctctgacctgaaatacgaatgtagagattcctaa

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