Tupaia chinensis (Chinese tree shrew): 102500922
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Entry
102500922 CDS
T02978
Name
(RefSeq) chromosome unknown open reading frame, human C9orf72
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04140
Autophagy - animal
tup05014
Amyotrophic lateral sclerosis
tup05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102500922
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102500922
05022 Pathways of neurodegeneration - multiple diseases
102500922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102500922
Membrane trafficking [BR:
tup04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102500922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
102500922
NCBI-ProteinID:
XP_006143143
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQESVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCETESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
LSTTRLDPCLTQHCLPSIQLGACHGSVSQQVLDEQELRTIMLKFKVSLNFEARFMHHPGS
LGYYPDDNTDILSKLPMWKLMATCLLPILSGKKGSVTGIEILQDAGQDLWTTQKVRRIWG
TFIEDLLRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacactctgcccaccaccatctccagctgttgccaagacagagatcgctttaagt
ggtgaatctcctttactagcagctacctttgcttactgggacaatattcttggtcctaga
gtgagacacatttgggctccaaagacagagcaggtacttctcagcgatggagaaataaca
tttcttgccaaccacacccttaatggagaaatccttcgaaatgcagagagtggggctata
gacgtaaagttttttgtcttgtctgaaaagggagtaattattgtttcattaatcttcgat
gggaattggaatggggatcggagcacctatggactgtcaattatacttccccagacagag
cttagtttttacctcccacttcacagagtgtgtgttgacagattaacacatattatccgg
aaaggaaggatatggatgcataaggaaaggcaagaaagtgtccagaagattgtcttagaa
ggcacggaacgaatggaagatcagggtcagagtattattccaatgcttactggggaagta
attcctgtaatggaactcctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagtactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctaaatgccatcagctcacacttgcaaacctgtggctgttctgtggtagtaggtagcagt
gctgagaaagtgaataagatagtgagaacgttatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaaacagaatcatcatttaaatatgagtcagggctctttgta
cagggcctgctaaaggattcaactggcagctttgtgctacccttccgacaagtcatgtat
gctccgtatcccaccacacacatagacgtggatgtcaatactgtcaagcagatgccacct
tgccacgaacatatttataatcagcgcagatatatgagatcagagctgacagcgttctgg
agagccacttcagaagaagacatggctcaagatacaatcatctacacagacgaaagcttc
acccctgatttgaatatttttcaagatgtcttacacagagatactctagtaaaagccttc
ctggatcaggtgtttcatttgaaacctggtttatccctcaggagtactttccttgcacag
ttcctgcttgtccttcacagaaaagccttgacactaataaaatatatagaagatgataca
ctgagcaccacaagactggatccttgtcttacacagcactgtctgcccagcatccagctt
ggtgcctgccatggatcagtgtctcagcaagtcctggatgaacaggaactacggaccatt
atgctgaagtttaaagtttccctgaattttgaagcgagatttatgcatcaccctggcagt
cttggatattatcccgatgacaacactgacattttaagcaaacttcctatgtggaaactg
atggctacgtgtctcctacctattttgagtgggaaaaaaggttcagtgacaggaattgag
attctccaggatgctggtcaagacttatggacaacacaaaaagtaaggaggatatgggga
actttcattgaagatttactcagaagataa
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integrated database retrieval system
