Tupaia chinensis (Chinese tree shrew): 102502097
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Entry
102502097 CDS
T02978
Symbol
RAPGEF6
Name
(RefSeq) Rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04015
Rap1 signaling pathway
tup04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
102502097 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102502097 (RAPGEF6)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
102502097
NCBI-ProteinID:
XP_006166955
LinkDB
All DBs
Position
Un
AA seq
1618 aa
AA seq
DB search
MNSPVDPSARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINHNGERQTITDDADVNSYLSLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIAR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIILL
WVNNHFNDFEGDPAMTQFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKAARES
PLRFSLNGGSEKGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPADIDQTSQEKG
NKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTTAKE
VVSQAVHEFGLTGAPETYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNME
TETLCSDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLESKT
GNTHLKEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIIS
GLNLAPVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPV
VKKDMTFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLG
SLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSCLDIETDEEKF
QMMSLQWEPAYGTLTKNLNEKRSAKSSEMSPVPMRSAGQTTKAHLHQPHRVSQVLQVPAV
NLHPIRKKGQAKDTAMSTGLPQKVLGTTEEISGKKHTEDTISVASSLHSSPPASPQGSPR
KGYTLTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDERCSSQALAVPESSGAL
EKTERPSGIGDHSQLGPGWTLSKPSLLKGLVVSSSMSSEEISHEHILIEAADSGRGSWTS
CSSSSHDNFQSLPNPKSWDILNSYKHTHLEDPIAEVEPTDCEPYSCPKGCSRTCGQCKGS
REPNQLRQSWTSSSSLSDTYEPNYGTVKRRVLESTPAESSEVLEPKNATDPAYKTVTSST
EKGLIVYCVTSPKKDDRYREPPPTPPGYMGISLADLKEGPHPHLKPPDYSVAVQRSKMMP
NSLSRLPPASLSSNPVARVPSKTVTQPQRHNLQPSHPKLADVPDADSEADENEQVSAV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacctgtggaccccagcgctaggcaggcgctgaagaagaagccaccggagcgg
actccagaggacttaaatactatttattcgtatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttagattgatgtctgcaagagcacgctatgagagatacagtggc
aatcagattcttttttgttcagaaactattgctagatgttggtatatcctgctttctggg
tctgtgcttgtgaaagactccatggtgttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacga
aggtttcggaaaattaaccataatggagagcgccaaaccattactgatgatgcggacgtt
aacagctatctctctcttccagctgatcttaccaagatgcaccttacagacaaccctcat
ccacaagtgactcatgtgtcttctagtcagtctggttgtagcattgccagtgactccggg
agcagcagtttgtctgatatctatcaggctactgagagtgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaggatgaagaagaggaagatgaagagatt
gatcgaacagatccattgcaggggcgagatcttgttcgagaatgtcttgaaaaagagcct
gcagacaaaactgatgatgatattgaacaattactggagttcatgcaccagctccctgct
tttgcaaacatgaccatgtctgtgaggagagaactctgttcagtgatgatttttgaagtg
gtagagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaatcagtcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactccaactctggataagcagtacatgcatggaattgccagg
actaaagtagatgattgtcagtttgtttgcatagcccaacaggattattggagaatttta
aatcatgtggaaaaaaatacccataaagttgaggaagagggtgaaattgttatggttcat
gagcaccgggaactagaccggagtggaaccaggaaaggacatattgtaattaaggcaaca
cctgagcgcctcatcatgcatttaatagaagagcattctattgtggacccaacttatata
gaagatttcctattaacttacaggacatttcttgaaagtcctttagatgttgggatcaaa
ttgttggaatggtttaagatcgacagcttaagggataaggtgacacggattatattatta
tgggtaaataatcattttaatgatttcgaaggtgatccagctatgactcaatttctagag
gaatttgaaaaaaatctggaagatacaaaaatgaacggtcatctccggttattgaatatt
gcctgtgctgcaaaggctaaatggaggcaggttgtgctgcaaaaagccgcccgtgagtct
cctctgcgtttcagccttaatggaggaagtgaaaaaggatttggtatttttgttgaagga
gtagaacctggtagcaaagctgctgatgcaggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgagaatattacatttgtgaaagcccttgaaattctgaggaac
aacactcatcttgcgcttactgtaaagaccaacatttttgtgttcaaagaactccttagt
aggactgaacaagagaaatctggtgtccctcatattcccaaaattgctgaaaagaaaagt
aatcgccactcaatccaggatgtaccagcagatattgaccagacatcacaagagaaagga
aataagaaagttaaagcaaatactgtttcaggcgggagaaacaaaatcaggaaaattttg
gataaaacacgatttagtatcttgcctccaaaattatttagtgatggaggactgagccag
tcacaagatgacagtattgtgggaacgaggcactgtaggcacagtctggctataatgcct
attcctggaacactctcatctagcagccctgatctcctgcagcctaccaccagcatgttg
gatttttccaatccttcagctgttggtttttactatattccagaccaagttataagagtt
ttcaaagcagatcaacaaagttgctacattatcatcagtaaagacactacagctaaagaa
gtggtttctcaagctgttcatgaatttggtttgaccggtgcacccgagacatactctctc
tgtgaagtttctgtcactcctgaaggtgtcataaaacaaagacgacttccagatcaattc
tccaaactagctgataggattcaactcaatggaaggtattatttaaaaaataatatggag
acagaaaccttatgttcagatgaagatgctcaagaactagtcaaggaaagccaactgtct
atgctgcagctcagtaccattgaggtggccacccagctgtcaatgagagactttgacttg
ttccgtaatattgagcctactgaatacattgatgacctttttaagttagagtccaaaaca
ggaaatactcacctgaaagagtttgaggacattgtcaatcaagagacattctgggttgcc
tctgagatcttaactgaatcaaatcaacttaagcgaatgaaaatcattaagcatttcatt
aaaattgcacttcattgccgagaatgtaagaactttaattccatgtttgcaataataagt
ggcttgaacttggcacctgtagcacgactcagaggtacttgggaaaagttaccaagcaaa
tatgaaaagcatctccaagatctacaagacctttttgatccatctagaaatatggcaaag
tatagaaatattctgagtagtcaaagcatgcagcctccaattattccactcttccctgtt
gtcaagaaagatatgacatttctacatgaaggaaatgattctaaagtagatggtttagta
aactttgagaaattaaggatgattgccaaggaaatccgtcaagttgttcgaatgacttct
gctaacatggacccagctatgatgttccgacaaaggaagaagaggtggcggagtctgggg
tcattgagtcaaggcagcacaaattcaaacatgctggatgttcagggaggagctcataaa
aaaagggcacgccgcagttctctacttaatgccaagaagctatacgaggatgcccagatg
gcaaggaaagtaaagcagtatctttcctgtctggatatagagacagatgaagagaaattc
cagatgatgtcattgcagtgggagcctgcatatggtaccctaaccaaaaatttgaatgag
aaaagatcagccaaatcatcggaaatgtctccagtacctatgaggtcagctggccaaaca
accaaagcccacttgcatcagccccacagagtaagccaggtgcttcaggtgccagctgtt
aatttgcaccccatcaggaagaagggacaagcaaaagatactgcaatgagtacagggtta
cctcagaaagttttaggaacaactgaagaaatcagtggtaagaaacatacggaagacact
atttctgtggcgtcatccttacattctagtccacctgcatctcctcaaggttcgcctcgt
aaaggttatacacttacaccatcagctaaatctgacaacttgtctgactccagccatagc
gagatttcctcacggtcaagcatcgtaagcaattgttctgtcgactccatgtctgcagct
ctgcaggatgaacggtgttcctctcaggctctggcagttcctgaatccagtggggcactg
gaaaagacagagcgcccctcaggaataggagaccatagtcagcttgggcctgggtggaca
ctctcaaagccatctctactcaagggtttagttgtctcatcttctatgagcagtgaagag
atatctcatgaacatatccttatagaagcagctgacagtggtcgtggaagttggacttcc
tgttcaagcagctcccatgacaatttccaaagccttccaaacccaaaaagctgggatatt
ttgaactcttataaacatacccatttggaggaccccattgctgaggttgaacccactgac
tgtgagccctattcctgccctaaaggctgttctagaacttgcggtcagtgtaaaggaagc
cgagagcccaatcagttgcggcagagctggacatcctccagctccctatctgacacatac
gaaccaaactacgggacagttaaacggagagtgttggagagcaccccagccgaatcatct
gaagtcttggagcccaagaatgccacagacccagcttataaaactgtcacttcaagtaca
gaaaagggcttgattgtgtactgtgtcacctcacccaagaaggacgataggtatagggag
ccacctcctactcctccaggatatatggggatttctttagcagacctaaaggaaggaccc
cacccgcacctaaaacctccagattatagtgtggcagtgcagaggtcaaagatgatgcct
aacagcctgtctagactgccaccagcttctctcagtagcaaccctgtggcccgtgttcca
tcgaagactgtaactcagcctcagaggcacaatttgcagccatcccatcctaaactagca
gatgtgcctgacgcagatagcgaagcagatgaaaacgaacaggtttcagcagtctag
DBGET
integrated database retrieval system
