Tetranychus urticae (two-spotted spider mite): 107360536
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Entry
107360536 CDS
T04901
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107360536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tut03041
]
107360536
Spliceosome [BR:
tut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107360536
Complex C
U5 SnRNP specific factors
107360536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Septin
Motif
Other DBs
NCBI-GeneID:
107360536
NCBI-ProteinID:
XP_015782697
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MSGAFPDEQLYDEFGNYIGPDIESSEDDSEPEVEDVDEEMDDRDDDRGKGAMGTGDASDD
DDNEPTGNEIVLHEDKKYYPSAEQIYGPDVETLVQEEDNQALTEPIIKSVKTSTFSHQIS
DIPQTTYSLEFMTDLMDTPDLIRNVALVGHLHHGKSTFIDCIVEQSHVDLGQKDGKSYRY
TDTLYTEQERGVSIKASPITIVMQNLKSKSFLINLLDTPGHVNFSDEVTAAIRLSDGVVL
FVDAAEGVMLNTERLLKHAIQEGSALTLCINKIDRLITELKLPPLDAYYKLRHIVDEING
LIQLYSDEEDRVVLSPLFGNVCFATSQFHVCFTLKSFAYHYAETYGNSFNPDEFAARLWG
DVYFDNTNRRFTKKAPTNASQRSFIQFILEPIYKLFAQVVGDVDTVLPDLIGELGIRLTK
SEAKLNIRPLLRLICQRYYGNFNGFVDMLVEHVPSPNSNSKHRIETTWKGPISSPLAQEM
IKCDPNGVLVVHTTKQYSTQDASTFHVFGLVVNGTLQAKQTVKILGEGYSSLDEEDSRMM
TVGRLWIYESRYSIEVKEVPCGNWVLIEGIDQAIVKTATIVDPSYDGELFIFKPLKFNTQ
SVIKIAVEPVNPSELPKMLEGLRKCNKSYPLLQTKVEESGEHVILGTGELYLDCVMHDLR
KMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENQIV
QINWPKRKLGEFFQKKYDWDLLAARSIWAFGPDQSGPNILVDDTLPSEVDKNLLGMVKDS
IVQGFQWATREGPLCEEPIRNVKFKILDAVVANEPIHRGGGQIIPSARRVAYSAFLMATP
RLMEPYYFVEVLAPADCVSAVYTVLSKRRGHITQDIPVPGSPLYTVKAFIPAIDSFGFET
DLRTHTQGQAFCLSVFHHWQIVPGDPLDKSFVIRPLEPQPAPHLAREFMIKTRRRKGLSE
DVTINKFFDDPMLLELAKADAMSL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgcatttccagatgaacaattatacgatgagtttggtaattatatcggacca
gatatagaatcatctgaggatgattctgaacccgaggttgaagatgtcgatgaggaaatg
gatgatcgtgatgatgataggggaaaaggtgctatgggtaccggtgatgcttctgatgat
gatgacaatgagccaactggtaatgagattgtcttgcatgaggataagaaatattaccca
tcggcagagcaaatttatggacctgatgtagaaactttagttcaagaagaagataaccag
gcattgactgagccaatcattaaatcggtcaaaacaagcacattttcccaccaaatttcg
gatatacctcaaacaacttatagcttggagttcatgactgatctgatggatacaccagat
cttatcagaaatgttgcgcttgtcggacatcttcatcatggcaagagtacatttattgac
tgtatagttgaacaatctcacgttgatcttggtcaaaaagacggcaaaagttatcggtat
acagatactctctatactgaacaagagagaggagtaagcatcaaggcttcgcctattacc
atcgtaatgcagaatttgaaaagtaaatcatttctgattaatcttcttgacactcctggt
catgttaacttttcagatgaagttactgcagcgattcgattatctgatggagttgtattg
tttgtagatgctgctgagggtgttatgcttaatacagaaagattgttaaagcatgctatt
caagaaggttcagctcttactctttgtataaacaagattgatcgactgataacggaacta
aaactgcctcctcttgatgcatactataaactgagacacatagttgatgagatcaatgga
ttgattcaattgtattctgatgaagaagatcgagtggtactatcgcctttatttggtaat
gtatgctttgcaacatcacaatttcacgtttgtttcacacttaaatcatttgcttatcat
tatgctgaaacctatggtaactcattcaatcctgatgaatttgctgcccggctttgggga
gatgtttactttgacaatactaatcgaagattcacgaaaaaagcaccaacaaatgcttca
cagagaagtttcatccaatttattttagagccaatttacaaactatttgcgcaagtggtt
ggtgatgttgatacagttttacctgatcttattggtgagcttggtatccgattaacgaaa
agtgaggctaaactgaatataagacctttgcttcgtctgatttgtcaaagatattatggc
aatttcaatggatttgtggatatgcttgttgaacatgtgccttctccaaactcaaattca
aaacatcgaattgaaacaacatggaaaggcccgattagctcgccgttagctcaagaaatg
atcaaatgtgatcctaatggagttctggttgtacacacgactaaacaatattcaacccaa
gatgcatcaactttccatgtgtttggacttgtggtaaacggaactctgcaagctaaacaa
accgtaaagatattgggtgaaggttattcaagcttagatgaagaggattctcgaatgatg
accgttggtcgcttatggatttatgagtcaagatatagtattgaggttaaagaagttccc
tgtggtaattgggtactcatcgaaggtatcgatcaagcaattgtgaaaacagccaccatt
gttgatccttcttatgatggtgaacttttcatctttaaaccccttaaattcaatactcaa
tcagttattaaaatcgccgtagaacctgttaatccatcagaattacctaaaatgttagaa
ggtctacgtaaatgtaacaaatcatatccattattacaaactaaagtagaagaaagtgga
gaacacgtaatcttaggtactggtgaattataccttgactgtgttatgcatgatttgcga
aaaatgtattcagaaattgacatcaaagttgccgatcctgttgtatctttctgcgaaact
gtcgtagaaacatcatcacttaaatgttttgccgaaacaccaaataaaaaaaataaacta
acaatgattgccgagcctttggagaaaggactagctgaagatattgaaaaccaaattgtt
caaattaactggcctaagcggaagcttggtgaatttttccagaaaaagtatgattgggat
ttgcttgctgctcgatccatttgggcctttggaccagatcaaagtggccctaatattctc
gttgatgatacgcttccttctgaagttgataaaaatttacttggcatggtaaaagacagt
atcgttcaaggtttccaatgggccacccgtgaaggtccactttgtgaagaacccattcgt
aatgtaaaatttaaaattttagatgcagtagtagcaaatgaaccaattcatcgcggtggt
ggtcaaattattccgagtgctcgtcgtgttgcttactctgcttttcttatggcaactcct
cgtcttatggaaccctattattttgtggaagttttggcaccagctgattgtgtttctgct
gtttatacagtattatctaaacgtagaggtcacattacacaagatattcccgttccaggc
tcacctttatacacagtgaaggcttttattcctgccattgattcatttggctttgagact
gatcttcgaactcatactcaaggccaggcgttttgcctttcagttttccatcattggcaa
attgttcctggtgatccattggataaatcattcgtaattagaccattagagccgcaacca
gctcctcacttggctcgagagttcatgataaaaactcgaagacgaaaaggattaagtgaa
gatgtgacaatcaacaaatttttcgatgaccctatgctactcgaacttgctaaagctgat
gccatgagtttgtaa
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