KEGG   Tetranychus urticae (two-spotted spider mite): 107365189
Entry
107365189         CDS       T04901                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
tut  Tetranychus urticae (two-spotted spider mite)
Pathway
tut03018  RNA degradation
tut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107365189
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107365189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tut03019]
    107365189
   03041 Spliceosome [BR:tut03041]
    107365189
Messenger RNA biogenesis [BR:tut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107365189
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     107365189
Spliceosome [BR:tut03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    107365189
 Complex C
  U2 snRNP components
    107365189
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin DUF8043
Other DBs
NCBI-GeneID: 107365189
NCBI-ProteinID: XP_015788150
UniProt: T1JT48
LinkDB
Position
Unknown
AA seq 113 aa
MDPSYKEQGAEAAQEASGTGDHQVEEPLDLIRLSLDERIYVKMRHGRELRGHLHAYDQHL
NIVLGDVEEIITNVEIDEETYEEVYKITKRNVPMLFVRGDGVILVSPPIRAGN
NT seq 342 nt   +upstreamnt  +downstreamnt
atggatccatcatacaaagaacaaggagcagaagctgctcaagaagccagtggcactggt
gaccatcaagttgaagagccattggatttgattcggttaagtttagatgaaaggatttat
gttaaaatgagacatggacgtgaattgagaggtcatcttcatgcttatgatcaacatcta
aatattgtccttggtgacgtagaagagatcatcacaaatgtcgaaattgacgaagaaact
tatgaggaagtttataaaataaccaaaagaaatgtacctatgcttttcgtcagaggtgat
ggtgttattctggtctcacctcctatccgtgctggaaactag

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