Tetranychus urticae (two-spotted spider mite): 107368214
Help
Entry
107368214 CDS
T04901
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107368214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tut03400
]
107368214
Enzymes [BR:
tut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107368214
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107368214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_IV
Bunya_NS-S
Motif
Other DBs
NCBI-GeneID:
107368214
NCBI-ProteinID:
XP_015791476
UniProt:
T1KXJ6
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MSVDRNKSFAEFSDLCESILKAKRKDKVCLLADYILSWRSHPGYNATNPETSFFPCLQLL
CPALDRSRPAFGLKEFSLVNQYLRILGINKKSKEGEMISYYKLPKHAKVQSDLSSIIMKI
LASKGRTQNSDLSIKDVNDCLTRIALSYQDGNQSGINSNLEHLILNLGPLENKWLIRIIL
KSLNFRLSETVILNTFHPDARSFYDCNQDLAEVCVKLADDRIRGFVVSLTVFKPFVPMLS
ERIEIKKINSITSGKPFCIEKKYDGERIVLHKQGDVFKYFSRNGFDFSESFNKSFTPFID
PCFNKISDCIIDGEMLGFNVSSNSLITKSQLKFDIKKLTDGDLEAFHPVYFVFDILVCNG
QQLTSKPLKERSQILSEYLQTKENWLMHADKQDGNDKYDTIRCLNDAIDKRDEGIIVKFW
DSIYKPNIRRNSGWFKLKPDYIEGLMDDLDLLIVGGYYGDGRRAGIISRFMLAVAVKEDD
CIDGRRFRSFGKVGSGYSDSELKTLLEKLEPHWVKFNPSDPPSFLELGKAKPEFYVEPKN
SFILQVKASEFMESDDFAVGTTLRFPRVVCIRYDKKYSDCMTTEELSQLQEQGNLFTRQI
GDLSDDDDEPVKKRRKPVSDRKFASHFILANLDSVEMCKDILQGREMCVLNGSSELPKIS
AEKLIVQYGGKISANPTKECYCLIAHSVEDLRVKNLIKFGNYDILRLDWLMNVLEHQLFI
SPSYHDYIVMTSETRESLSRYFDQFGDSYFVDMSRDDLLRAVESIGYDYQIDNDDEDAEE
SENFYSEANISSLNGCEVFIDSMPSDSDNYPNIAFARASLTFGGAEISEEEENSTHQLIL
NDKNELILKNRQPSDLSYIFDSDQCQWHPITD
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgatagaaataagtctttcgctgaattttctgatctatgtgagtccatttta
aaggccaagaggaaagacaaagtctgtttgcttgccgattatattttgagttggagatcg
cacccaggatataatgcgactaatccggaaaccagttttttcccttgtctccagttgcta
tgtccggccctggatcgatcacgtcctgcttttgggttaaaggaattcagtttggtcaac
caatatctcaggattcttggcatcaacaagaaaagtaaagaaggagaaatgatctcgtat
tacaagcttccaaaacatgcaaaagttcaatctgacttatcaagcataatcatgaaaatc
ttagctagcaaaggccgaacacagaacagtgatctatcaatcaaagatgtcaatgactgc
ctaactcgtattgctctttcctatcaagatggaaatcaatctgggataaattcaaacttg
gaacatttgattcttaatcttggtcccctggaaaacaagtggctgattcgaataatttta
aaatctcttaatttccgtctatctgagactgtcattttaaacacattccacccagatgcc
cgttctttttatgattgcaatcaagatttagctgaagtttgcgtgaaactggctgatgat
cgtattcgtggatttgtagtctctttaactgtcttcaagccatttgtcccgatgttgtct
gaaagaatagaaatcaaaaagataaactcaatcacctctgggaaaccattttgcattgaa
aagaaatatgatggagagcgaatcgtattgcataaacaaggcgatgtttttaaatatttt
tctcgcaacgggttcgatttctcagaatccttcaataagtcgtttactccattcatagat
ccctgtttcaacaagatatctgactgtataattgatggagagatgctaggatttaatgta
tcaagtaacagtctgattaccaaaagccaactcaaatttgacataaaaaagttaaccgat
ggtgatttagaagctttccacccagtttattttgtgtttgacatacttgtttgcaatgga
cagcagctaacgtcaaaacctttaaaagaacgatctcaaattctttccgaatacctgcag
acgaaagaaaattggttgatgcatgctgataaacaagatgggaatgataaatatgatact
atccgctgtttgaatgatgctattgacaaacgagatgaaggaattattgtcaaattctgg
gattccatttataagcccaacatccgaaggaatagtggatggttcaaattgaagccggat
tacattgagggtttgatggatgatttagatctcttgattgtaggtggttattatggtgat
ggacgcagagctggaataatatcacgttttatgttggctgttgctgttaaagaagatgat
tgtatcgatggtcgccgatttcgttcatttggtaaagttggcagtggttactccgatagc
gaactcaaaactctcttagaaaagttggaaccacactgggttaaatttaacccttcagac
cctccttcattcctagaacttggaaaagccaaaccagaattttatgttgaacccaaaaac
tctttcattcttcaagtaaaagcatcagaattcatggaaagcgatgattttgctgttgga
accactctaagatttccaagggttgtttgcatacggtatgataaaaaatacagtgactgc
atgacaaccgaagagctgtctcaactacaagaacaaggcaatttatttactcgtcaaatt
ggcgatctatcagatgatgatgatgaacctgttaaaaaaaggcgaaaacctgttagtgac
agaaaatttgcctctcattttatcttggccaatttagattcagttgaaatgtgcaaagat
atcttacagggaagagaaatgtgtgttctgaatggatcaagtgaattaccgaaaatctca
gctgaaaagctaattgtccaatatggaggtaaaatatctgcaaacccaaccaaagaatgt
tattgtttaatagctcattccgttgaagacttgcgagtcaaaaatttgattaaatttgga
aactatgatatcttgaggctagattggttgatgaatgtgctggaacatcaattatttatc
agcccatcttatcatgattacatcgtcatgacttctgaaactcgtgaaagcctttcaagg
tacttcgatcaatttggtgattcgtattttgttgatatgtctagggacgatttattgcga
gctgttgaatcaattggatatgattatcaaatcgataatgacgatgaagatgccgaagaa
agtgaaaacttttattcagaagccaacatctcgagtttgaatggttgtgaagttttcatt
gattcaatgcctagcgatagcgacaattatcctaacatagcatttgctcgtgcttcatta
acatttggtggagctgagataagcgaggaggaagaaaattccactcaccagttaatttta
aacgataaaaatgagcttattttgaaaaatcgccaaccttccgatctgagttacattttt
gattctgatcaatgccaatggcatcctatcacagattga
DBGET
integrated database retrieval system
