Trichomonas vaginalis: 4768538
Help
Entry
4768538 CDS
T01022
Symbol
TVAGG3_0043390
Name
(RefSeq) U4atac snRNA binding
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
tva
Trichomonas vaginalis
Pathway
tva03008
Ribosome biogenesis in eukaryotes
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4768538 (TVAGG3_0043390)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4768538 (TVAGG3_0043390)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4768538 (TVAGG3_0043390)
03009 Ribosome biogenesis [BR:
tva03009
]
4768538 (TVAGG3_0043390)
Spliceosome [BR:
tva03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
4768538 (TVAGG3_0043390)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
4768538 (TVAGG3_0043390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
DUF2229
baeRF_family2
Motif
Other DBs
NCBI-GeneID:
4768538
NCBI-ProteinID:
XP_001322826
UniProt:
A2E9R8
LinkDB
All DBs
Position
IV:complement(6749223..6749901)
Genome browser
AA seq
131 aa
AA seq
DB search
MSTDLPPGVSPKAYPLASSELNAAILELVKDASQNKQLRKGANEVTKTLNRSVAEIVLIA
GDTDPIEIVMHLPLLCEDKNVQYIFVPSRAALGRACGVSRPVVACSIVKKDNSRLKKNIE
NLKIKIEQALV
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagatctcccaccaggtgtttcaccaaaagcttatccacttgcttcaagtgag
ctcaatgccgctatcttagaacttgttaaggatgcttctcagaacaaacaacttcgcaaa
ggtgctaacgaagttacaaagacactcaatcgttcagtagcagaaatagtccttattgct
ggtgatacagatccaatcgaaattgttatgcatcttccacttctttgcgaagataagaat
gtacaatatatttttgtcccatctcgtgctgcacttggtcgtgcttgtggtgtttctcgt
ccagttgttgcatgctcaattgttaagaaggataactctagattgaagaagaatattgaa
aacttaaagataaagatagaacaagccctcgtataa
DBGET
integrated database retrieval system
