KEGG   PATHWAY: tvc03010
Entry
tvc03010                    Pathway                                
Name
Ribosome - Tachysurus vachellii
Class
Genetic Information Processing; Translation
Pathway map
tvc03010  Ribosome
tvc03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Tachysurus vachellii [GN:tvc]
Gene
132837458  rpl11; 60S ribosomal protein L11 isoform X1 [KO:K02868]
132837459  mrpl3; 39S ribosomal protein L3, mitochondrial [KO:K02906]
132837547  rpl30; 60S ribosomal protein L30 [KO:K02908]
132837567  mrpl12; 39S ribosomal protein L12, mitochondrial [KO:K02935]
132837658  mrpl24; large ribosomal subunit protein uL24m [KO:K02895]
132837694  [KO:K01981]
132837701  [KO:K01986]
132837702  [KO:K01986]
132837703  [KO:K01986]
132837704  [KO:K01986]
132837707  [KO:K01981]
132837710  [KO:K01979]
132837711  [KO:K01979]
132837714  [KO:K01979]
132837715  [KO:K01982]
132837716  [KO:K01982]
132837717  [KO:K01981]
132837756  mrpl43; 39S ribosomal protein L43, mitochondrial [KO:K17424]
132838008  mrps16; 28S ribosomal protein S16, mitochondrial [KO:K02959]
132838022  mrpl20; 39S ribosomal protein L20, mitochondrial [KO:K02887]
132838054  rpl32; 60S ribosomal protein L32 [KO:K02912]
132838279  rpl22; 60S ribosomal protein L22 [KO:K02891]
132838310  rpl29; 60S ribosomal protein L29 [KO:K02905]
132838316  rps23; 40S ribosomal protein S23 [KO:K02973]
132838354  mrpl10; large ribosomal subunit protein uL10m [KO:K02864]
132838718  mrps28; 28S ribosomal protein S28, mitochondrial [KO:K17407]
132839153  rpl24; large ribosomal subunit protein eL24 [KO:K02896]
132839299  mrpl39; 39S ribosomal protein L39, mitochondrial [KO:K17420]
132839685  mrpl16; 39S ribosomal protein L16, mitochondrial [KO:K02878]
132840030  rpl21; 60S ribosomal protein L21 [KO:K02889]
132840140  rpl22l1; 60S ribosomal protein L22-like 1 [KO:K02891]
132840148  mrpl32; 39S ribosomal protein L32, mitochondrial [KO:K02911]
132840437  mrpl17; 39S ribosomal protein L17, mitochondrial [KO:K02879]
132840800  rpl36a; large ribosomal subunit protein eL42 [KO:K02929]
132840923  rplp0; large ribosomal subunit protein uL10 [KO:K02941]
132840941  rpl7a; 60S ribosomal protein L7a [KO:K02936]
132841129  rpl12; 60S ribosomal protein L12 [KO:K02870]
132841279  mrps31; 28S ribosomal protein S31, mitochondrial [KO:K17410]
132841411  [KO:K01981]
132841412  [KO:K01981]
132841433  [KO:K01981]
132841449  [KO:K01981]
132841484  [KO:K02885]
132841551  rps28; small ribosomal subunit protein eS28 [KO:K02979]
132841647  rps6; 40S ribosomal protein S6 [KO:K02991]
132841686  rps27a; ubiquitin-40S ribosomal protein S27a [KO:K02977]
132841704  rplp2l; ribosomal protein, large P2, like [KO:K02943]
132841707  rps3a; small ribosomal subunit protein eS1 [KO:K02984]
132841873  rpl9; 60S ribosomal protein L9 [KO:K02940]
132842149  mrpl36; large ribosomal subunit protein bL36m [KO:K02919]
132842213  mrps21; 28S ribosomal protein S21, mitochondrial [KO:K02970]
132842313  [KO:K02980]
132842577  mrps7; small ribosomal subunit protein uS7m [KO:K02992]
132842788  mrps18b; 28S ribosomal protein S18b, mitochondrial [KO:K16174]
132842824  rpl15; 60S ribosomal protein L15 [KO:K02877]
132842911  rps27.1; 40S ribosomal protein S27.1 [KO:K02978]
132843221  rps7; small ribosomal subunit protein eS7 [KO:K02993]
132843264  faua; FAU ubiquitin like and ribosomal protein S30 fusion a [KO:K02983]
132843591  [KO:K01981]
132843592  [KO:K01981]
132843594  [KO:K01981]
132843595  [KO:K01981]
132843596  [KO:K01981]
132843597  [KO:K01981]
132843598  [KO:K01981]
132843599  [KO:K01981]
132843600  [KO:K01981]
132843601  [KO:K01981]
132843602  [KO:K01981]
132843603  [KO:K01981]
132843604  [KO:K01981]
132843605  [KO:K01981]
132843606  [KO:K01981]
132843607  [KO:K01981]
132843608  [KO:K01981]
132843609  [KO:K01981]
132843610  [KO:K01981]
132843611  [KO:K01981]
132843612  [KO:K01981]
132843613  [KO:K01981]
132843615  [KO:K01981]
132843616  [KO:K01981]
132843617  [KO:K01981]
132843618  [KO:K01981]
132843619  [KO:K01981]
132843620  [KO:K01981]
132843621  [KO:K01981]
132843622  [KO:K01981]
132843623  [KO:K01981]
132843624  [KO:K01981]
132843625  [KO:K01981]
132843626  [KO:K01981]
132843627  [KO:K01981]
132843628  [KO:K01981]
132843629  [KO:K01981]
132843630  [KO:K01981]
132843631  [KO:K01981]
132843632  [KO:K01981]
132843633  [KO:K01981]
132843634  [KO:K01981]
132843635  [KO:K01981]
132843636  [KO:K01981]
132843637  [KO:K01981]
132843638  [KO:K01981]
132843639  [KO:K01981]
132843640  [KO:K01981]
132843641  [KO:K01981]
132843642  [KO:K01981]
132843643  [KO:K01981]
132843644  [KO:K01981]
132843645  [KO:K01981]
132843646  [KO:K01981]
132843647  [KO:K01981]
132843648  [KO:K01981]
132843649  [KO:K01981]
132843651  [KO:K01981]
132843652  [KO:K01981]
132843653  [KO:K01981]
132843654  [KO:K01981]
132843655  [KO:K01981]
132843657  [KO:K01981]
132843658  [KO:K01981]
132843659  [KO:K01981]
132843661  [KO:K01981]
132843662  [KO:K01981]
132843666  [KO:K01981]
132843674  [KO:K01981]
132843677  [KO:K01981]
132843689  [KO:K01981]
132843695  [KO:K01981]
132843701  [KO:K01981]
132843713  [KO:K01981]
132843724  [KO:K01981]
132843736  [KO:K01981]
132843748  [KO:K01981]
132843753  [KO:K01981]
132843754  [KO:K01981]
132843755  [KO:K01981]
132843756  [KO:K01981]
132843757  [KO:K01981]
132843758  [KO:K01981]
132843759  [KO:K01981]
132843760  [KO:K01981]
132843761  [KO:K01981]
132843762  [KO:K01981]
132843763  [KO:K01981]
132843764  [KO:K01981]
132843765  [KO:K01981]
132843766  [KO:K01981]
132843767  [KO:K01981]
132843768  [KO:K01981]
132843769  [KO:K01981]
132843770  [KO:K01981]
132843771  [KO:K01981]
132843772  [KO:K01981]
132843773  [KO:K01981]
132843774  [KO:K01981]
132843775  [KO:K01981]
132843776  [KO:K01981]
132843777  [KO:K01981]
132843778  [KO:K01981]
132843779  [KO:K01981]
132843780  [KO:K01981]
132843781  [KO:K01981]
132843782  [KO:K01981]
132843783  [KO:K01981]
132843784  [KO:K01981]
132843785  [KO:K01981]
132844018  mrps9; 28S ribosomal protein S9, mitochondrial [KO:K02996]
132844150  rpl5a; 60S ribosomal protein L5a [KO:K02932]
132844206  mrpl37; 39S ribosomal protein L37, mitochondrial [KO:K17418]
132844343  mrpl47; 39S ribosomal protein L47, mitochondrial [KO:K17428]
132844354  rpl5b; 60S ribosomal protein L5b [KO:K02932]
132844535  rps26l; ribosomal protein S26, like [KO:K02976]
132844538  rplp2; 60S acidic ribosomal protein P2 [KO:K02943]
132844654  rps10; 40S ribosomal protein S10 [KO:K02947]
132844977  rps13; 40S ribosomal protein S13 [KO:K02953]
132845073  rpsa; small ribosomal subunit protein uS2 [KO:K02998]
132845327  dap3; 28S ribosomal protein S29, mitochondrial [KO:K17408]
132845381  uba52; ubiquitin-60S ribosomal protein L40 [KO:K02927]
132845751  mrps15; small ribosomal subunit protein uS15m [KO:K02956]
132845877  rpl18; 60S ribosomal protein L18 [KO:K02883]
132845968  mrpl13; 39S ribosomal protein L13, mitochondrial [KO:K02871]
132845973  mrps2; 28S ribosomal protein S2, mitochondrial [KO:K02967]
132846198  rps27.2; 40S ribosomal protein S27.2 [KO:K02978]
132846222  rps19; 40S ribosomal protein S19 isoform X1 [KO:K02966]
132846323  rps9; 40S ribosomal protein S9 [KO:K02997]
132846385  mrpl51; large ribosomal subunit protein mL51 [KO:K17432]
132846631  mrps6; 28S ribosomal protein S6, mitochondrial [KO:K02990]
132846824  mrpl2; 39S ribosomal protein L2, mitochondrial [KO:K02886]
132847072  mrpl14; large ribosomal subunit protein uL14m isoform X1 [KO:K02874]
132847204  mrps26; 28S ribosomal protein S26, mitochondrial [KO:K17405]
132847324  rps24; 40S ribosomal protein S24 isoform X1 [KO:K02974]
132847405  rpl13; large ribosomal subunit protein eL13 [KO:K02873]
132847778  rpl7; 60S ribosomal protein L7 [KO:K02937]
132847917  mrps14; 28S ribosomal protein S14, mitochondrial [KO:K02954]
132847932  rps20; 40S ribosomal protein S20 [KO:K02969]
132848467  mrpl15; large ribosomal subunit protein uL15m [KO:K02876]
132848550  rpl34; large ribosomal subunit protein eL34 [KO:K02915]
132848740  rps4x; small ribosomal subunit protein eS4 [KO:K02987]
132848862  mrpl52; 39S ribosomal protein L52, mitochondrial [KO:K17433]
132849784  rpl31; 60S ribosomal protein L31 [KO:K02910]
132849895  mrps22; 28S ribosomal protein S22, mitochondrial [KO:K17401]
132850073  mrpl30; 39S ribosomal protein L30, mitochondrial [KO:K02907]
132850146  rpl8; large ribosomal subunit protein uL2 [KO:K02938]
132850492  mrpl21; 39S ribosomal protein L21, mitochondrial [KO:K02888]
132850997  rpl35a; 60S ribosomal protein L35a [KO:K02917]
132851022  rps3; 40S ribosomal protein S3 [KO:K02985]
132851234  rpl4; 60S ribosomal protein L4 [KO:K02930]
132851458  mrpl45; 39S ribosomal protein L45, mitochondrial [KO:K17426]
132851556  [KO:K02980]
132852068  mrpl33; 39S ribosomal protein L33, mitochondrial [KO:K02913]
132852087  mrps5; 28S ribosomal protein S5, mitochondrial [KO:K02988]
132852111  mrpl4; large ribosomal subunit protein uL4m [KO:K02926]
132852172  rps15; 40S ribosomal protein S15 [KO:K02958]
132852348  rpl13a; 60S ribosomal protein L13a [KO:K02872]
132852606  mrpl35; 39S ribosomal protein L35, mitochondrial [KO:K02916]
132853201  mrpl40; 39S ribosomal protein L40, mitochondrial [KO:K17421]
132853254  rpl6; 60S ribosomal protein L6 [KO:K02934]
132853367  mrps25; 28S ribosomal protein S25, mitochondrial [KO:K17404]
132853441  mrps27; 28S ribosomal protein S27, mitochondrial [KO:K17406]
132853738  rpl10a; large ribosomal subunit protein uL1 [KO:K02865]
132854051  kgd4; 28S ribosomal protein S36, mitochondrial [KO:K17414]
132854168  rpl36; large ribosomal subunit protein eL36 [KO:K02920]
132854181  mrpl55; large ribosomal subunit protein mL55 [KO:K17436]
132854389  mrpl54; large ribosomal subunit protein mL54 [KO:K17435]
132854609  mrpl1; 39S ribosomal protein L1, mitochondrial [KO:K02863]
132854641  mrpl19; 39S ribosomal protein L19, mitochondrial [KO:K02884]
132854938  mrpl41; large ribosomal subunit protein mL41 [KO:K17422]
132855161  mrps30; 39S ribosomal protein S30, mitochondrial [KO:K17409]
132855559  mrps11; 28S ribosomal protein S11, mitochondrial [KO:K02948]
132855564  mrpl46; 39S ribosomal protein L46, mitochondrial [KO:K17427]
132855602  mrpl18; 39S ribosomal protein L18, mitochondrial [KO:K02881]
132855767  rpl37a; large ribosomal subunit protein eL43 [KO:K02921]
132856071  rack1; small ribosomal subunit protein RACK1 [KO:K14753]
132856105  rpl39; 60S ribosomal protein L39 [KO:K02924]
132856267  rpl27a; 60S ribosomal protein L27a [KO:K02900]
132856351  mrpl11; 39S ribosomal protein L11, mitochondrial [KO:K02867]
132856527  zgc:114188; 40S ribosomal protein S17-like [KO:K02962]
132856747  rps27l; 40S ribosomal protein S27-like [KO:K02978]
132856749  rps17; 40S ribosomal protein S17 [KO:K02962]
132856755  rsl24d1; probable ribosome biogenesis protein RLP24 [KO:K02896]
132857075  rpl26; 60S ribosomal protein L26 [KO:K02898]
132857094  [KO:K01981]
132857100  [KO:K01981]
132857104  [KO:K01981]
132857134  [KO:K01981]
132857190  mrpl23; large ribosomal subunit protein uL23m [KO:K02892]
132857197  [KO:K01981]
132857219  mrps35; small ribosomal subunit protein mS35 [KO:K17413]
132857260  rps18; small ribosomal subunit protein uS13 [KO:K02964]
132857262  [KO:K01981]
132857270  [KO:K01981]
132857347  rps5; 40S ribosomal protein S5 [KO:K02989]
132857376  rpl18a; large ribosomal subunit protein eL20 [KO:K02882]
132857560  [KO:K01981]
132857943  mrpl28; 39S ribosomal protein L28, mitochondrial [KO:K02902]
132858256  rps8a; small ribosomal subunit protein eS8 [KO:K02995]
132858379  mrpl44; 39S ribosomal protein L44, mitochondrial [KO:K17425] [EC:3.1.26.-]
132858427  mrps23; 28S ribosomal protein S23, mitochondrial [KO:K17402]
132858921  mrpl42; 39S ribosomal protein L42, mitochondrial isoform X1 [KO:K17423]
132858999  mrps10; small ribosomal subunit protein uS10m isoform X1 [KO:K02946]
132859002  mrps33; 28S ribosomal protein S33, mitochondrial [KO:K17411]
132859151  rps16; 40S ribosomal protein S16 [KO:K02960]
132859220  mrps18a; 39S ribosomal protein S18a, mitochondrial [KO:K02963]
132859819  mrpl22; 39S ribosomal protein L22, mitochondrial [KO:K02890]
132859825  rpl23a; 60S ribosomal protein L23a [KO:K02893]
132859827  mrps12; 28S ribosomal protein S12, mitochondrial-like [KO:K02950]
132859867  rpl17; 60S ribosomal protein L17 [KO:K02880]
132859876  rpl35; large ribosomal subunit protein uL29 [KO:K02918]
132859923  mrps18c; 28S ribosomal protein S18c, mitochondrial [KO:K02963]
132859940  [KO:K14753]
132859967  mrps17; 28S ribosomal protein S17, mitochondrial [KO:K02961]
132860192  rpl28; 60S ribosomal protein L28 [KO:K02903]
132860222  rps14; 40S ribosomal protein S14 [KO:K02955]
132860348  rpl37; 60S ribosomal protein L37 [KO:K02922]
132860646  rpl23; large ribosomal subunit protein uL14 [KO:K02894]
132860647  rpl27; large ribosomal subunit protein eL27 [KO:K02901]
132860893  rps15a; small ribosomal subunit protein uS8 [KO:K02957]
132860978  mrps34; 28S ribosomal protein S34, mitochondrial [KO:K17412]
132860980  rpl14; 60S ribosomal protein L14 [KO:K02875]
132861003  [KO:K02925]
132861122  rps2; 40S ribosomal protein S2 [KO:K02981]
132861251  rpl38; 60S ribosomal protein L38 [KO:K02923]
132861289  rps11; 40S ribosomal protein S11 [KO:K02949]
132861327  rpl3; 60S ribosomal protein L3 [KO:K02925]
132861348  rpl19; large ribosomal subunit protein eL19 isoform X1 [KO:K02885]
132862036  [KO:K02891]
132862072  rps26; 40S ribosomal protein S26 [KO:K02976]
132862074  rps21; small ribosomal subunit protein eS21 isoform X1 [KO:K02971]
132862350  rps12; 40S ribosomal protein S12 [KO:K02951]
132862490  mrpl27; 39S ribosomal protein L27, mitochondrial [KO:K02899]
132862829  rpl10; large ribosomal subunit protein uL16 [KO:K02866]
132862920  mrpl38; 39S ribosomal protein L38, mitochondrial [KO:K17419]
132863028  mrps24; small ribosomal subunit protein uS3m [KO:K17403]
132863036  mrpl48; 39S ribosomal protein L48, mitochondrial [KO:K17429]
132863388  mrpl49; mitochondrial ribosomal protein L49 [KO:K17430]
132863580  rps25; small ribosomal subunit protein eS25 [KO:K02975]
132863929  mrpl9; 39S ribosomal protein L9, mitochondrial [KO:K02939]
132863944  rplp1; 60S acidic ribosomal protein P1 [KO:K02942]
132864286  mrpl53; 39S ribosomal protein L53, mitochondrial [KO:K17434]
l-rRNA  [KO:K26192]
s-rRNA  [KO:K26191]
Reference
PMID:10476961
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
PMID:10476960
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
PMID:10497122
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
PMID:10937989
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
PMID:10937990
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
PMID:11014182
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
PMID:11014183
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
PMID:25775265
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
PMID:23222135
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
PMID:23636399
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
PMID:25901680
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
PMID:20007716
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

DBGET integrated database retrieval system