Tachysurus vachellii: 132841569
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Entry
132841569 CDS
T09596
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132841569 (scn4aa)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132841569 (scn4aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
A_deaminase_N
Motif
Other DBs
NCBI-GeneID:
132841569
NCBI-ProteinID:
XP_060719917
LinkDB
All DBs
Position
2:24037937..24061790
Genome browser
AA seq
1837 aa
AA seq
DB search
MAKMVPTTRTKVFRRFTPESLAEIEKFIEEQKIREEREEVDLETRPTAPSSDLEAGKTLP
MIYGDPPEELLNTALEDIDPFYKTQKTFIVITKGNTIYRFNAEPSCYMISPFNLVRRAAI
RVLIHSLFSMFIMITILSNCVFMTMSNPPAWSKIVEYVFTGIYTFEATTKVVSRGFCIGS
FTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQ
SVKKMVDVMILTVFALAVFALIGLQLFMGNLRHKCIRWPISNSTTDDYNSTLTDEFNPTF
INTTFDFTAYIENEDNQYFLEGSLDALLCGNSSDAGKCPEGFTCMKAGRNPNYGYTSYDT
FGWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYD
EQNQATIAEAREKEEEFQRMLEQLKNEEQQLQVGSMVSLASQRTQSNGSEIGTDDGDDVI
KDCNGRFIPRLVIHRAPTLKKSASADEQNADSKSMCSQHSMMHLENPGLSQRTASAISVR
STREELEEAQRPCPPGWYKFADIFLKWDCCEPWIIFKKWVNFVVMDPFVDLGITICIVLN
TLFMAMEHYPMSPGFEHVLTVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVT
LSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKIAEDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCME
VAGAGMCLVVFLMVMVIGNLVVLNLFLALLLSSFSGDNLSASDEDGEMNNLQIAIGRITR
GVNWVKSFIVSFVGRLLCRKPSEGDARGDECDDTDKKESFSLNNLDEGKIADGLTNCLDA
LSLNVPIAKAESDDEDEDSQASSEEEGTHKKKGVLNDGDSSVCSTVDYKPPEPPPEEEEE
EEPEPDDPEACFTEDCVRRFPCLTVDITQGRGKSWWNLRRACYTIVEHDYFETFIIFMIL
LSSGALAFEDIYIERRRVIKIILEYADKVFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDF
LIVDVSLISLTANLLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYRCINTSTEELVPIELVNNKSDCIALMLTNETRWVN
VKVNYDNVGFGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINIYMYLYFVIFIIFG
SFFTLNLFIGVIIDNFNQQKQKFGGEDLFMTEEQKKYYNAMKKLGSKKPVKPIPRPANKI
QGLVFDLISQQFFDIFIMVLICLNMVTMMIETDDQSMEKEYVLYQINLIFIVVFTGECIL
KMVALRQYFFTVGWNVFDFIVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLI
KGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGVDDIFNFETF
GNSILCLFEITTSAGWDGLLLPMLNSGPPDCDPDIENPGTEVRGNCGNAGMGIMFFCSYI
IMSFLVVVNMYIAIILENFNVAQEESGDLLCEDDFEMFNETWERFDTEGTQFLDYNHVFA
FVDALQEPLRIHKPNRIALVNMDLPVVIGDKIHCLDILLAVTQHVLGDTTEMAAMRVSIE
EKFKMNNPSKASFEPIVTTLRRKEEEQAAIRIQQSYRKHLLKRSIRHASFLHRSTKRKVR
QHEAEEPPETEGLIARKMNALYGSNAELAMALEHKSRPTPVKPASSGLTVPVNHQRAQGR
QRVVPVEVTNEVILRSAPTTTQDSSRREVATAKESKL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatggtccctaccacacgcaccaaagtgttccgccgcttcactccggaatca
ctggcggagatcgagaagttcatcgaggagcagaaaatcagggaggaaagagaggaagtg
gatctagagaccaggccaacagcaccaagcagtgacctggaggcagggaagactctgccc
atgatctacggagatccaccagaggagctgctaaacacggctttagaagacatcgacccc
ttctacaaaacacaaaaaacatttattgtaatcaccaaaggcaacacaatctacaggttt
aatgcagaaccgtcctgttacatgatcagcccatttaatctcgtaagaagagccgccatt
agagttctcatacattcgttatttagcatgttcatcatgatcactattctctccaactgt
gtgtttatgacgatgagcaaccctcctgcctggagtaaaattgtggagtatgtctttact
ggtatatatacctttgaggcaacaactaaagtggtgtcgcgaggcttctgcattgggtct
tttacattccttcgtgatccatggaactggctggatttcatggtgatcagcatggcgtac
atcactgagtttgttgaccttggcaacgtatcggcacttcggacgttccgtgtgctcaga
gctcttaaaacgatcactgttattcctggcttaaagaccattgttggagctctgatccag
tctgtcaagaagatggtggatgtgatgattctgaccgtctttgccctggctgtttttgcc
ctcattggcctgcagctgttcatggggaatctgcgccacaagtgtatacgctggcccatt
tcgaacagcacgacggacgactacaactccaccctaacggatgaattcaaccccactttc
atcaacactacttttgacttcacagcctatattgaaaatgaagataaccagtactttctg
gagggcagcttagatgctttactatgtggcaacagttctgatgctggaaagtgtccggaa
gggttcacgtgcatgaaggctggaaggaacccgaattacggttacaccagctacgacact
tttggctgggctttcctcgctctctttaggctcatgactcaggactactgggagaactta
tttcaactgactcttcgtgcagctgggaaaacctacatgattttttttgtggtggtcata
tttctgggatcattctacctcatcaacctaatcctggcagtagttgccatggcgtatgat
gaacagaaccaagccacaattgctgaagcccgggaaaaagaggaagaatttcagagaatg
ctggagcagcttaagaatgaagagcaacagttgcaagttggtagcatggtatcattggcc
agtcagagaacacaaagcaatgggtcagaaatagggacagatgatggggacgatgtaata
aaggactgtaatggcaggtttattcctcgtctggtgatccatagagccccaactttgaaa
aaatcagcatcagccgacgagcaaaacgctgacagtaaatccatgtgctcccagcatagc
atgatgcacctggaaaaccctgggctctctcagagaacagccagtgccattagtgtacgc
agcacaagggaagagttggaggaggcccagaggccttgtcctccaggctggtataagttt
gcggatatatttttgaagtgggactgctgtgaaccctggattatcttcaagaaatgggtt
aattttgtggtgatggatccttttgtggaccttggcattaccatttgtatcgtactcaat
acacttttcatggctatggagcactatcccatgagtccaggatttgagcatgtgctcact
gttggcaacttggtgttcactggtattttcactgctgaaatggtgttcaagctcattgcc
atggacccttactactacttccaggtgggatggaacatttttgacagcatcatcgtcact
cttagcctggtggagttaggcctggccaatgtgcagggtctgtctgtcctcaggtccttc
cgtttgctgcgagtctttaagctggctaaatcctggcccacgctcaacatgctgatcaaa
atcattggtaactcagtgggtgcactggggaacctgactttggtgctggccatcattgtc
ttcatctttgccgttgtaggcatgcagctctttggcaagagctacaaggagtgtgtgtgt
aagatcgcagaggactgcacgctgccgcgctggcacatgaacgattttttccattcgttc
ctcatcgtcttccgcatcctgtgtggcgaatggattgaaacgatgtgggactgcatggag
gtggccggagcaggcatgtgccttgtagtgttcctcatggtcatggtcataggaaaccta
gtggtgctgaacctgttccttgccttgctgctcagctcgttcagtggggacaatctatca
gccagtgatgaagatggagagatgaacaatctccagatcgcaatcggccgcatcaccagg
ggcgtcaactgggtcaaatcctttatcgtcagctttgtaggccggttattgtgcaggaaa
ccttccgagggcgatgcaagaggagacgaatgtgacgatacagataaaaaggaaagcttt
tcattaaacaaccttgatgaagggaagatagcagatgggttgaccaactgtctggatgct
ctgtctctgaatgtaccgattgccaaagctgagtctgatgatgaagatgaagattcgcag
gcttcatcagaagaagagggtacacacaaaaagaagggtgttttgaatgatggagactct
tcagtgtgtagcacagtggactacaaacctccagaacctccacctgaggaagaggaggaa
gaggaaccagagcctgatgatccagaagcttgttttactgaagactgtgtgagacgattt
ccatgtctgactgtggacatcactcagggaaggggaaagagttggtggaatctgcgcaga
gcttgctacaccatagtggagcatgattactttgaaaccttcatcatcttcatgattctt
ctcagtagtggtgcactggcctttgaggacatttacattgagcgtcgcagggtgattaag
attatcttggagtatgcagacaaggtcttcacatatatttttgttatagagatgttactg
aaatgggttgcatatggcttcaagacttacttcaccaatgcctggtgctggctagatttt
ttaatcgtcgatgtgtcacttatcagtttaacagcaaatttgttgggttattcagagctg
gggcctataaagtctctcagaactcttagggctcttcggcctttacgtgccctatccaga
tttgaaggaatgagggtggtagtcaacgcattggttggtgccattccttccatcatgaac
gtgctcctggtgtgtctaatattctggctgatattcagtatcatgggggtcaacctgttt
gctggaaaattctaccgctgcattaataccagcacagaagaacttgtccctattgagcta
gtgaacaacaagagtgactgcatagcactaatgctcactaatgaaacacgctgggtcaat
gtcaaggtcaactatgacaatgtgggcttcggttacctttccctgctacaagtggccaca
tttaaaggctggatggacattatgtatgctgcagtggattctagagaggtggaagaacag
ccatcatatgagattaacatttatatgtatctgtattttgtcatcttcatcatctttggc
tccttcttcaccctcaaccttttcattggtgtcatcattgacaattttaatcagcaaaag
caaaagttcggtggggaagatctgttcatgactgaggagcagaaaaagtactacaatgcc
atgaaaaagctgggttccaagaagcctgtcaaacccatacctcgccctgcgaataagatc
cagggcttggtctttgacctcatatctcagcagttctttgacatcttcatcatggttctc
atttgcctcaacatggttaccatgatgattgagacagatgaccaaagtatggagaaagaa
tacgttctctatcagattaacctcatctttattgtcgtattcaccggggagtgcatcctc
aaaatggtggcgctgagacaatacttcttcactgttggatggaatgtgtttgatttcatc
gttgtcatcctttctatagctggtctcatgctgtcagacataattgagaagtactttgtg
tccccaacgctgttccgtgtcatccgtctggctagaattggccgtgtgctgcgtcttatc
aaaggggcgaaaggaatcaggacgcttttatttgctctgatgatgtcacttcctgccctg
ttcaacatcggcctgcttctcttcctcatcatgtttatcttttccatttttggcatgtct
aacttcgcctatgtaaaaaaggaggctggcgttgatgacatttttaactttgagaccttt
gggaatagcatcctttgcctatttgagatcacgacttcagctggttgggatgggttactg
ctcccaatgttaaacagcggtcctcctgactgtgatcctgacattgaaaaccctggaaca
gaggtgaggggcaactgtggcaatgcaggcatgggcataatgttcttctgcagttacatt
atcatgtctttcttagtggtggtcaacatgtacattgccatcatcctggagaacttcaat
gttgcccaggaggagagcggtgacctgctatgtgaggacgactttgagatgtttaatgag
acttgggaaaggtttgacacagaagggacgcagtttttggattacaaccacgtgtttgcc
tttgtcgacgcactgcaagaacctttgcgtattcacaaaccgaacagaatcgctctggtc
aatatggatctgccggtcgtaattggcgacaaaatccactgtctagatattttgctggcc
gtcacccaacatgtcctcggagacactactgagatggcagccatgagggtgagcattgag
gaaaagttcaagatgaacaacccaagtaaggcctcctttgagcccatcgtcaccactctg
aggagaaaggaggaggagcaagcagccattcggatccagcaatcgtaccgtaaacatctc
ctcaaacgctctatccgtcacgcatccttcttgcatcggtccacgaaaagaaaagtgagg
cagcatgaggctgaggagccacccgaaacagagggtttgatagcacgcaagatgaatgct
ctctacggaagcaatgcagagctggctatggctttggagcataagtctaggcctacgcca
gtcaaacccgcttcatctggtctcacagtgccagtaaaccaccagcgggcccaaggccga
cagagagtagtgccagtagaagtaacgaatgaagtaattctccgttctgcacccacaact
acacaggactcttcgaggcgagaggtggccacagcaaaagaatccaaattatag
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integrated database retrieval system
