Tachysurus vachellii: 132846110
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Entry
132846110 CDS
T09596
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03250
Viral life cycle - HIV-1
tvc03260
Virion - Human immunodeficiency virus
tvc04060
Cytokine-cytokine receptor interaction
tvc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132846110 (cd4-1)
03260 Virion - Human immunodeficiency virus
132846110 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132846110 (cd4-1)
04514 Cell adhesion molecules
132846110 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tvc04090
]
132846110 (cd4-1)
CD molecules [BR:
tvc04090
]
Proteins
132846110 (cd4-1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
I-set
Ig_2
V-set_CD47
Sp38
C2-set
DUF5849
TAS2R
LapA_dom
GPR15L
Orf78
FeoB_associated
EphA2_TM
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
132846110
NCBI-ProteinID:
XP_060726630
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All DBs
Position
5:23673692..23692598
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AA seq
474 aa
AA seq
DB search
MSFLLVLLLMLAPFHSSAEVPEPVLAQVGNAVTLPLQSWEKSDNIHVNWNFNGDSLISRN
PTSSHTQVAEKWKGRISLTENFALLITSVTENDFGIFTCDQHVLMSSKTTTYKLYEVKMS
TPSPLLVNDSLNLSCEINREGFNLVRPTVRWLGPDNTIYAGQSYENKYTLRLFRVSSNHN
GNWICEVQYGARKLNAMSNVVIVDLAPSPLDPIYTSDSSSNLLIPCFFSSKISWATVNAT
GVTGGSWSFTSLNGSASLPPLLKLHPNPSPVWKIPPNTPSWLIESEVKNNELGVKISRVS
INHRGSYTCSLEFMKRTLRHRVQVEVLQVISSAGKNMYEGSTLNLTCTLGHPMPPDLEVN
WKSPYGSSLSSLRLPHLTELSIPGVRLKDSGRWTCELKKNKTVLATATITLKIEKAPVSV
WLVVGIIAGILVLILVSAIVIFSIRRHRKVMKHTRRKRRFCCCKNPRPKGFYKT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttattggtgttattacttatgctggcaccatttcactcatctgcagaagta
ccagaacctgttttagcacaggtagggaatgctgttacacttcccttgcagtcatgggag
aaatctgacaatattcatgtcaactggaactttaatggagactctttgattagtagaaat
cctacatcatctcatacacaagtggcagaaaagtggaagggacgaatctctcttacagaa
aacttcgctcttctcattacatctgttactgagaatgactttggaatcttcacatgtgac
cagcatgtactcatgagcagtaagacgaccacgtacaaactttatgaagtaaagatgtcc
acaccgtcaccattgctggttaatgacagtctcaatctgtcctgtgaaatcaatcgtgaa
ggatttaatcttgttcgtcctactgtacgctggttagggccggataatacaatttacgct
ggacagtcatatgagaacaaatacactctcagattgttccgagtctccagcaatcacaat
ggaaactggatctgtgaagtgcaatatggtgctcgtaaattaaatgccatgtctaatgtc
gtgattgtagacctcgccccctcgccattggatcccatctacacatctgactcctcctct
aatttacttataccatgtttcttttcctcaaaaatttcctgggccacagtaaatgccaca
ggtgtgacgggaggtagctggagcttcacttcacttaatggttctgcatccttacctcct
ctcctcaaattacatcccaatccctctccagtctggaagattccccctaacacacccagc
tggctcatagagagtgaggtaaaaaataatgaactcggtgtgaagatttccagggtgtct
ataaatcacagaggaagctacacctgtagcctggagttcatgaaaaggacactcagacat
agagtgcaggttgaggtgctacaagttatttcctcagcaggtaaaaatatgtatgagggc
agtacgctgaacttgacctgcactcttggtcatcccatgccccctgacctggaagtaaat
tggaaatccccatatggttcatctctgtcaagtcttaggcttccccatctcacagagctg
tctatccctggggtaagactgaaggacagtgggcgatggacctgtgaactgaaaaagaac
aaaacagtgcttgcaacagctacgatcacactgaaaattgagaaagctccagtcagtgtt
tggcttgttgtaggtattattgctggtattctggtcttgatcttggtttctgcaattgtt
atcttcagcattcgtaggcacagaaaggtgatgaagcacacacggcgtaagaggagattc
tgctgctgtaagaatcctcggcctaaaggtttctacaagacctga
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