Tachysurus vachellii: 132846291
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Entry
132846291 CDS
T09596
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132846291 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132846291 (phc1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
132846291 (phc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
132846291
NCBI-ProteinID:
XP_060726936
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Position
5:28004715..28015199
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AA seq
840 aa
AA seq
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MKSETERRGSGAPAQSSMEQAEDQSSSGSSSSSTTGSGGNTRPAQISQMSLYERQAVQAL
QALQRQPNAAQYFQQLMLQQQINSAQLHNLAAVQQATLAASRQSSSPNTSVSAVSTAQCT
GNLSSTSGGATMTNPRPVGPATSVTSSALSQSVLLSGNSAGQRQMYLRVNRSLRAPQLIF
MPGGAATTAVATVAQQQPQQQQQQPQQQQQEIPPTTSSTQSDMDQVQNLALHCASAPRIA
AVKTEYPDRKDPSSFSLGPQSQQQQQFSPSAQQINTNKLPTPPSSTSSSLSSSSSSSSPS
LPLSQLLLSPSRLTPAATVTHILVPSSNVPTSSLGYPKPSVTAQTLVVQPLQQQQQNGGD
KMAGPVPIQPKTAQSSRLSSQLPPRQPPPILPAPPPSHPPHVPVQLLGSRQGALGNSQAV
AVPQARTCYTQQDSSTHTPNHGSATNAVTMVTAMETGSAGSGLKVTNQNAEPSQISSSAE
IQTPDGDHSSTVVPPAGETMFEQTGTTQMKPAISSLKRKSESDVAGEMTSETTAQNCPSI
PDSAPPLSPAPSLDTAPEIAFSTPPTLSLSLPHPRAPLPQAVVKPQVLTHLIEGFVIQEG
AEPFPVTGPIKERAEGVPVPLSMQPENSTPSVLKCEFCESFAPASQFRGTKRFCSKTCAK
RYNVSCSHHFRTSRGRSSAPVYDEMARRRGPHRSSSEIACAKIAGRHLPVKCRSESSRSE
EVSSCEGEEEEEEDYLSPGSSFSCSRPARCGPQMDESAQGSLPLDGDHFLSASPSHWSVE
EVCRFISSLQGCEDLAGHFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICASINSLKE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgagacagagagacgagggagtggagctccagcccagtccagcatggagcag
gcagaggatcagagcagctcgggttcctccagcagcagcactacaggctccgggggaaac
actcgacctgcacagatctcacagatgtctctgtacgaacgacaagctgtacaggctctg
caggctctacagcgacagcctaatgcagctcagtatttccagcagctgatgcttcaacaa
cagattaacagtgctcagcttcacaacctcgccgctgttcagcaggccacgcttgctgcc
agtcgacagtcgagttctccaaacaccagcgtgtctgcagtcagcacagcacagtgcaca
ggtaatttaagcagcacttctgggggcgcgaccatgaccaacccccgcccagttggccct
gccacatctgtgacatcatccgctcttagccaatcagtgttgctgagtggaaactcagca
ggtcagagacagatgtatctaagagtgaatcgctcgctcagggctcctcagctcatcttt
atgcctggtggcgcagcaacaactgctgtggcaacagttgcccagcagcagcctcagcaa
caacagcaacagccccagcagcagcaacaggaaatccctcccacaacttccagtacccag
tcagatatggaccaggtgcagaatcttgccctgcactgcgcttctgccccccgaatagct
gccgttaagaccgaataccctgacaggaaggatcctagttcattctctcttggcccacag
tctcagcagcagcagcagttttctccgtcagctcagcaaatcaacaccaataaacttccc
actcctccttcctccacctcttcctctctatcttcctcttcctcttcctcctctccctct
ctccctctctcccagctcttgctctctccatctcgactcacacctgctgccacagtgacc
cacatcctggtcccgagctccaatgtccctacttcctctctgggttaccccaaacccagt
gtgacggctcagacgctggtggtgcagccgcttcagcagcagcagcagaacggaggggac
aaaatggcaggccctgtccctatccaaccgaaaacagcccaaagcagtcgtctgtcctca
cagttgccccctcggcagcctccgcctattctcccggctcctcccccttcccacccccca
cacgtcccggtccagttgctcggttccaggcagggggcactgggaaactcccaggctgta
gcagtcccacaggcccggacctgctacacccagcaggacagctccactcacacccccaac
cacggctctgccactaatgcagtcaccatggtaactgctatggagacgggcagtgctggc
tcaggccttaaagtgaccaatcagaatgcagaacccagtcagatcagctcttctgctgag
attcaaactccagatggagatcacagcagcactgtagtgccacctgctggagagactatg
tttgaacaaactggaaccacacagatgaagcctgcgatcagctccttgaaaagaaaatca
gaatcagatgttgcaggtgagatgacctctgaaaccactgctcagaactgtccatcaatc
ccagactccgcccctccactctctcctgctccctcattggacactgctcctgagatagcg
ttctccactccaccgacactgtcactgtccctgcctcaccctcgagctcctctcccccag
gctgtggtcaaaccacaggtcctaactcaccttatcgaaggctttgttattcaggaaggc
gctgagccatttcctgtgacgggtccaataaaggagcgggctgagggtgttcctgtacct
ctctctatgcagccagaaaacagcaccccctctgtgctgaagtgtgagttctgtgagagt
tttgctcctgccagtcagttccgtggaaccaaacgcttctgctccaaaacctgtgccaag
aggtacaatgtgagttgcagtcatcatttccgcaccagtcgaggccgcagcagtgcgcct
gtgtatgatgagatggcgagacgcaggggtcctcacaggagcagctcggagattgcctgc
gctaaaatcgctggcagacacctgcccgtaaagtgtcgctctgagtccagtcgctcggaa
gaggtctctagctgtgaaggtgaagaagaagaagaggaagactatctctctccaggctcc
tccttctcctgttctcgccccgcacgctgtggccctcaaatggacgagtccgcacaaggc
agccttccattggatggagaccatttcctgtctgctagcccctcccactggagtgtggag
gaagtgtgtcgcttcatttcctctctgcaaggctgtgaggatctggcgggtcacttcctg
tctcaggagattgatggtcaggcactgctgttgctgaaggaggagcatctgatgagtacc
atgaacattaaactgggcccagccctcaagatctgcgcctccatcaacagcctgaaggaa
tga
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