Tachysurus vachellii: 132852789
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Entry
132852789 CDS
T09596
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc04620
Toll-like receptor signaling pathway
tvc04621
NOD-like receptor signaling pathway
tvc04622
RIG-I-like receptor signaling pathway
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132852789 (traf3)
04621 NOD-like receptor signaling pathway
132852789 (traf3)
04622 RIG-I-like receptor signaling pathway
132852789 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132852789 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Crescentin
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
zf-C3HC4_4
DUF1664
zf-RING_UBOX
IFT57
Laminin_II
FapA
Fzo_mitofusin
TMPIT
ATG16
Exonuc_VII_L
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
132852789
NCBI-ProteinID:
XP_060736207
LinkDB
All DBs
Position
10:complement(20687103..20698688)
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AA seq
556 aa
AA seq
DB search
MSLPHRVDGREQQIALQQQQSFLPQRGGFQDHFVMPPEPKYCCEHCHMVLCKPRQTECGH
RFCESCIIQLLSKTNPVCPADMEPLSPEKIFRDVCCHREIMTLKVFCRSAKNGCKEQMSL
QQVTDHLNMCEYFEVPCPLCKEKIMRKDMPEHLSHKCKYRETTCEFCKHKMALTELQKHK
ETVCPAFPVSCPNHCSFSSILRSELSIHQQDCPKAQVTCSFFRFGCTYKGLNQEIREHES
SFASEHLRLMMARSNTLEAKVEDVKNELLERYAVLPGLSSRLTEVEEQYKEMREKYRQVE
QKLSSMQKLMSAHSEKLLEVEMELRDLRSLRAMREDMEALRGAVESMRSVVASLDTVRSS
PGSHTLTSLETQLSRHDELLSVHDIRLADMDLKLQVLETASFNGTLIWKIRDYKRRKQEA
VASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFRQ
KVTLMLMDQGPTRKHLGDAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDD
TIFIKVTVDTSDLPDP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccgcaccgtgtggacgggcgggagcagcagattgctctgcagcagcagcag
tccttcctcccgcagcgtggtggttttcaggaccactttgtcatgcctcctgagcccaag
tactgctgcgagcactgtcacatggtgctgtgtaaacctcggcagaccgagtgcggacac
cgcttctgcgaaagctgcattatccagctgcttagtaaaacgaatccggtgtgcccagct
gatatggagccattatctccagaaaaaatatttcgtgatgtttgctgccatagagagatc
atgacactgaaagtcttctgccgcagcgcgaaaaacggatgtaaagaacaaatgagttta
cagcaggttacggaccatttgaacatgtgtgagtactttgaggtgccgtgtccgttgtgt
aaagagaagattatgaggaaggacatgcctgaacacttgagccacaaatgcaaataccgt
gagaccacctgtgaattctgcaagcacaaaatggccttaacggaactacagaaacacaaa
gaaactgtctgtcctgcatttccagtatcatgccccaatcactgttcattttcatccatt
ttaagaagcgagctgtccattcaccagcaagattgtccaaaggctcaagtcacatgctcc
ttctttcgttttggctgcacctacaagggtttgaaccaggaaattagggagcacgagtca
agctttgcctcagaacacttgcgactgatgatggccagaagcaatactcttgaggccaag
gtggaggacgtcaagaacgagctgctggagcgctacgcggttctcccgggtctgagcagt
cgtcttacagaagtggaggaacagtacaaagagatgagagagaaatatcgacaagtggag
cagaaactctccagcatgcagaagctaatgagcgcacactcagagaaactgctggaggtg
gagatggagctgagggatctgcggtcattaagggccatgcgtgaggacatggaagctctg
aggggtgccgtggagagcatgcgctctgtcgtagcgtcgctcgacactgtccgaagcagt
ccaggttcccacacgctaacctcattagagacacagctgtcacggcatgatgagctgctc
agtgtgcatgacattcgtttggctgacatggaccttaagctgcaggtgctggagacagcc
agcttcaatggaactcttatttggaagattcgtgactacaaacggcgcaagcaagaagcg
gtggcttctaaaacattgtcgctttacagccagcccttctataccggctattttggctac
aagatgtgtgcacgtgtttatctgaacggtgacggcatgggaaagggcacccacctgtca
ctgttctttgtggtgatgcgtggtgagtatgatgcgctgctgccatggccttttcgccaa
aaagtgacactcatgctaatggaccagggtcctacacgcaagcacttgggtgatgccttc
aagcctgacccaaacagcagcagcttccggcggccaacaggggagatgaacattgcatcg
ggttgtccgctctttgtcgcccagaccgttctggagaacggcacctacatcaaagatgac
accatcttcatcaaggtcacagtggacacttcagacctgcctgacccatga
DBGET
integrated database retrieval system