KEGG   Tachysurus vachellii: 132852892
Entry
132852892         CDS       T09596                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
tvc  Tachysurus vachellii
Pathway
tvc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132852892 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvc03041]
    132852892 (smndc1)
Spliceosome [BR:tvc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132852892 (smndc1)
 Complex B
    132852892 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    132852892 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 132852892
NCBI-ProteinID: XP_060736377
LinkDB
Position
10:complement(23779355..23783134)
AA seq 237 aa
MSDELVKQLSSYRAQLQQVEAALSTDQENEDLLKLQKDLQEVIELTKDLLTAQPAEGIAS
NNSSDAAPPKHSWKVGDRCMALWSQDGQQYEAEIEEIDSENGTAAITFTGYGNAEVVPLH
ALKAAEQAKSSKEEGSKPKSKKELQAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggatgaattggtgaagcaactgagcagctacagagctcagctccagcaggtggaa
gcggcgctctctacagatcaagaaaatgaagatctgctaaagttacagaaagaccttcag
gaggtgattgagttgacaaaagatttgttaacggctcagccagcagagggcatagctagt
aacaacagttcagatgctgcaccaccaaaacacagctggaaagtaggagatcgttgcatg
gctttgtggagccaggatggacagcagtatgaagcagagatagaggagatcgatagtgag
aacggcacagctgctatcaccttcacgggctatggcaatgctgaggtggtgcctctgcac
gcgctcaaagcagctgagcaagccaaaagcagcaaggaggaaggaagcaaacccaaatcc
aagaaggagctgcaggcagagcaacgggaatacaagaagaaaaaggcacagaaaaaagta
cagaggatgaaagagctggaacaagagcgagaggaccagaaatccaaatggcagcagttt
aacaataaagcttattcaaaaaacaagaagggtcaagtaaaacgcagtatattcgcctct
cctgagagtgtgaatggaaaagttggtgtgggtacatgtgggattgcagataaacccatg
actcaatataatgacacatccaaatacaatgtaaggcatttgatgccacagtga

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