Tachysurus vachellii: 132853384
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Entry
132853384 CDS
T09596
Name
(RefSeq) H-2 class II histocompatibility antigen, A-F beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
tvc
Tachysurus vachellii
Pathway
tvc04145
Phagosome
tvc04514
Cell adhesion molecules
tvc04672
Intestinal immune network for IgA production
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132853384
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132853384
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
132853384
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132853384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132853384
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132853384
Exosomal proteins of epithelial cells
132853384
Exosomal proteins of breast milk
132853384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
MHC_II_beta
DUF3185
C2-set_2
DUF7139
DUF202
Motif
Other DBs
NCBI-GeneID:
132853384
NCBI-ProteinID:
XP_060737060
LinkDB
All DBs
Position
11:complement(27313021..27315039)
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AA seq
264 aa
AA seq
DB search
MRLCAPTLLFILLPLFTGKAVNGYYGQGYGNCYYTGDLNSTEFTFSWYFNKVEYLRYNST
TDRYTGFTTYGTAGAAELNKDSSRSLYFYVDQLCKRSRDEYFTYILMTVKPEVTVRSLVV
SEPRSLSAMLLCSAYDYHPKGIKVLWLRDGEVVTEGVSSTEELSDGDWYYQTHSYLQYTP
RPGENISCVVQHVSLTRPLIITWERHLPEDQRNKLIIGIFLMVLGIVLAVVGFLYYMLRS
KEQTSRPVTLELTVSETSSQASDP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtgtgctccgactctcctcttcatactgctgcctttatttacaggtaaagca
gtaaatggttactatggacaaggctacgggaattgttattacactggagatctgaactcc
actgaattcactttctcttggtacttcaacaaggttgagtatctgaggtacaacagcacg
acagacagatacacagggttcaccacgtacggaacagccggggcagctgaactgaacaaa
gactccagtcgtagtctgtatttctatgttgatcagctctgtaaaagatccagagatgaa
tactttacttacatcctgatgacagtgaagcccgaggtcacggtgaggtcactggtggtg
tctgagcctcggtccctctcggccatgctgctgtgtagtgcgtatgattatcatcctaaa
ggaatcaaagtgttatggctgagagatggtgaggtggtgactgagggagtttcctccact
gaggagctttcagatggagactggtactatcagacccactcttatctacagtacacacca
agacctggggagaacatctcctgtgtggtgcagcatgtgagcttaacacgaccactcata
atcacctgggagcgtcaccttcctgaagatcagaggaacaagctgattatcggcattttc
ctcatggtgttggggatcgttttggctgttgttggatttctatattacatgctgagatct
aaagaacaaacttcccgtcctgtaactttagaactcactgtttcagagacaagttctcaa
gcttcagatccataa
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