KEGG   Tachysurus vachellii: 132853909
Entry
132853909         CDS       T09596                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 4 chain-like
  KO
K06752  MHC class II antigen
Organism
tvc  Tachysurus vachellii
Pathway
tvc04145  Phagosome
tvc04514  Cell adhesion molecules
tvc04672  Intestinal immune network for IgA production
tvc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    132853909
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132853909
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    132853909
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132853909
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132853909
Exosome [BR:tvc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132853909
  Exosomal proteins of epithelial cells
   132853909
  Exosomal proteins of breast milk
   132853909
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 Ig_2 C2-set_3 Cna_B
Other DBs
NCBI-GeneID: 132853909
NCBI-ProteinID: XP_060737932
LinkDB
Position
11:complement(26277828..26280123)
AA seq 248 aa
MFRLLILFIVQSAILNTANGDHLSVPRWCYWNKDDLSDMEFIESYIMNKIKYAEFNSTLG
KVVGYTETGVRNAEVWNKDTADLQARKAQVETVCKPNVGNYYSAVLSKTVEPQVKVKLVK
KSDGSHPAMLMCSAYNFYPPLIKVTWLRNGKEVKGGQTSTEEMADGDWYYQIHSHLEYTP
ESGEEISCVVEHASFKKPMSYKWDPSMSEPDKSKIAIGASGLVLGVVLSAAGFIYYRKKS
SGRILVPT
NT seq 747 nt   +upstreamnt  +downstreamnt
atgttcaggctcctgattctgttcatcgtccagtctgcgatcctgaacacagccaatgga
gatcacctgtcagttccacgttggtgttactggaataaagatgatctcagtgatatggag
ttcatagagtcttacatcatgaacaagattaaatacgctgagtttaacagcactctgggg
aaggttgtgggatacactgagactggtgtcagaaacgcagaggtatggaacaaagacact
gcagatctacaagcacgaaaagcccaggtggaaactgtctgtaaacctaatgttgggaat
tactacagcgctgttctgagtaaaacagttgagcctcaggttaaagtgaagttggtgaag
aaatcagacggctctcatcctgccatgttgatgtgcagcgcttacaacttctaccctcca
ctcatcaaagtgacctggctgaggaacggtaaggaggttaaaggaggtcagacgtccact
gaggagatggctgatggagactggtactatcagatccactcacacctggagtacacacct
gagtctggagaggagatctcctgtgtggtggaacacgccagcttcaaaaaacccatgagc
tataaatgggatccgtccatgtctgaacctgataagagtaagattgctatcggagcgtca
ggtctggttctgggggtcgtgctttcagctgctggattcatctactacaggaagaaatcc
tcaggacggatcctggtcccgacataa

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