Tachysurus vachellii: 132855231
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Entry
132855231 CDS
T09596
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04137
Mitophagy - animal
tvc04141
Protein processing in endoplasmic reticulum
tvc04210
Apoptosis
tvc04217
Necroptosis
tvc04621
NOD-like receptor signaling pathway
tvc04622
RIG-I-like receptor signaling pathway
tvc04920
Adipocytokine signaling pathway
tvc05132
Salmonella infection
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132855231 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132855231 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132855231 (traf2a)
09143 Cell growth and death
04210 Apoptosis
132855231 (traf2a)
04217 Necroptosis
132855231 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132855231 (traf2a)
04622 RIG-I-like receptor signaling pathway
132855231 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
132855231 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132855231 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
132855231 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132855231 (traf2a)
04121 Ubiquitin system [BR:
tvc04121
]
132855231 (traf2a)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132855231 (traf2a)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132855231 (traf2a)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132855231 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
zf-RING_6
zf-ACC
ATG16
zf-RING_UBOX
DEC-1_N
MATH
Motif
Other DBs
NCBI-GeneID:
132855231
NCBI-ProteinID:
XP_060740031
LinkDB
All DBs
Position
12:complement(22135782..22183201)
Genome browser
AA seq
581 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPRKILANKLEEKHLCNICQKILRRPFQAQCGHRFCSYCFNK
TVSSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEGCSWTGTIKE
YEATHEGQCDFMIIPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMSVEKEKIHEHERACS
YEHLNLLLHFIMGIKVSVESLQPQGLELASHKLKELQQSLCELEVKLGQLSAGAPVQGPC
VPCAPAPNPPPPAPPAPTLTTSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKAS
TFENIVCVLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMES
KMREMSAATYDGVFVWKITDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDG
TGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPV
SDMNIASGCPLFCPLPKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggaaccgtcccctccgtcttcactggaaggcaacaagccgggcttcccg
aggaaaatccttgccaacaagctggaagaaaagcatctgtgtaacatctgtcagaaaatc
ctacggaggccttttcaggcgcagtgcggacaccgattctgttcctactgctttaacaaa
acagtgagttctggtccccaaaaatgcagtgcttgtataaaagaagatatatttgaggag
ccaacatcgattctgaaacagggctgtgcttttcctgacaacgctgctaagagagaagtc
gaagccctcgaagcagtttgtatcaacgaaggctgcagctggacaggaaccatcaaggaa
tatgaggctacccacgagggacagtgtgattttatgatcatcccgtgtccgtcctgcaaa
gagctcctgagagccaacgaacttgaacgtcacaacgagcgcgaatgcccagagaggact
ctgaactgcaaatactgcaaagaaccttttcattttaaaaacattaaggcccacgatgag
atttgtccaaaatacccaatgatttgtgaaggctgtgcgaagaagaaaattcccagagaa
aagtacgtggatcacattaagctgtgtaccaaattccgcaccccatgcagatttcacgtt
gttggctgcgacatgtctgtggagaaggagaagatccatgagcacgagcgggcgtgctcg
tacgagcacctgaatctgctgctgcactttatcatgggcatcaaggtgagcgtggagagc
ctgcagccgcagggcctggaactggccagccacaagctcaaggagctgcagcagtctctg
tgcgagctggaagtcaagctgggtcagctgagcgctggggctcccgtgcaggggccctgc
gtgccgtgcgcgcctgcgcctaatcctccacctcctgcgccacccgcacccaccctgacc
acctcattcaccccattgcccagcgctgtcggcgccgccctcgagctgcagctgcacagc
gagaagaccaaggtggccgagctgagccgtcgctgccaggagctcgagctgaaggccagc
accttcgagaacattgtgtgcgtgctgaatcgcgagatggagcgctcagccaccaccatg
gaggcttacaaccgccagcaccggctcgaccaggacaagatcgagatcctcaacaacaag
gtacgtcagctggagaggacggtggggctaagggatctttccatcgtggagatggagagc
aagatgagagaaatgtcagccgccacctatgacggcgtgtttgtgtggaagatcacagac
tttgccaagaagaggcaagacgctgtagctggaagagccccagccatgttctcacctgca
ttttatacaagcaagtatggctacaagatgtgtttgcgcatctacctgaacggggatgga
acagggcgcggcactcacttgtctctgttcttcgtggtgatgaggggacacagtgatgcc
ttgcttaagtggccttttaaccagaaggtcaccctgatgctgcttgaccagaataacaga
gagcacatcattgacgccttccggcccgacatctcgtcctcgtcgttccagagacctgtc
agcgacatgaacatcgccagcggatgccctctcttctgccccctccctaagctcgactcc
aagaactcctacatccgtgatgacaccatcttcatcaaggccattgttgacctcactggc
ctttaa
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