Tachysurus vachellii: 132855784
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Entry
132855784 CDS
T09596
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132855784 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132855784 (tdg.1)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132855784 (tdg.1)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132855784 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
132855784
NCBI-ProteinID:
XP_060740973
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All DBs
Position
13:5628368..5635343
Genome browser
AA seq
430 aa
AA seq
DB search
MDERSYGSLPHVPSDYVQHWVQSAQQHLQALHAQYSHMANGNVAHFMEGHGEEPGMMEMP
VQMPHSAAPEPGPPQKAPTKGKRGRPASKEPKAKPGPKPKKAKAEKEGQPAEGAQEKIDE
SFKKVKRKIDRFKGMSEEEVMKRTLPDILTDNLDYVIVGINPGLMAAYIGRWFPGPGNHF
WKCLFLSGFTDQLLNHMHDQSLPEKYGIGFTNMVARATPGSKDLSSKELREGGKILVEKI
KKFKPLIVVFNGKCIYEMFCREIFGKKPKSLEFGVQPLKIPDSDTALYLMPSSSARCAQF
PRAQDKVHFYIKLRELRDQLKGVAKPKEVEEINYSFDLGLAKEDAKRMAIKEENYDPGYE
AAYGGAYGEPGTEEANGHCAFASGEAEAAAKEPRNQNAVGQIPDGKWMTNSFADQIPEIG
SSSQAQAEAV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaagttacggatctttgcctcatgtgccctcggattatgttcagcactgg
gttcagtcagcacagcagcatctccaagccctccatgcacaatattctcatatggctaac
ggtaatgttgcacacttcatggaaggacacggagaagaacctggaatgatggaaatgcct
gttcagatgccgcattctgcagccccggagcctggccctccccagaaagcacccactaaa
ggaaagcggggcagacctgcaagcaaagagcctaaagcaaaaccaggccccaagccgaag
aaggccaaggcggaaaaagagggccaaccagctgaaggagcccaggagaagattgatgag
tccttcaagaaagttaaaaggaaaatcgatcgcttcaagggcatgtctgaggaggaagtc
atgaaaaggactctgccagacatccttacagataacctggactatgtcattgttggaatc
aatccaggtctgatggctgcctacattggacgatggttccctggacccggaaaccatttt
tggaagtgcctgttcctatccggattcactgaccagctgctgaaccacatgcacgaccag
tctctccctgagaaatacggcatcggcttcactaacatggtggcgagagcaacaccggga
agcaaagatctctcaagtaaagagcttcgagaaggtggcaagattttagtggagaagatt
aaaaagttcaaacctctcatagttgttttcaatgggaaatgtatatatgaaatgttctgt
agagagatatttggcaaaaagcccaaatctctggaatttggcgtacagcccctcaagatt
cctgactcagacacggcgctgtatctgatgccctcctcaagtgcccgctgtgcccagttc
cctcgagctcaggacaaagtgcacttctacatcaaactccgagaactccgagaccaactg
aagggcgtggccaaacccaaggaagtcgaggaaatcaattactcattcgatctcggcttg
gctaaagaggacgctaagagaatggccattaaggaggagaattatgatcctggctatgag
gctgcatatggaggtgcatacggggaaccaggaaccgaggaagccaacggccactgtgcc
tttgcttctggagaagcagaagcagcagcaaaggagcccaggaatcagaatgcagtgggg
cagattccagatggaaagtggatgactaactccttcgccgatcagattcccgagatcggc
agctcgtcacaagcccaggcagaggctgtatga
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