Tachysurus vachellii: 132856230
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Entry
132856230 CDS
T09596
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132856230 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132856230 (tdg.2)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132856230 (tdg.2)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132856230 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF2024
Pantoate_transf
DUF3336
Motif
Other DBs
NCBI-GeneID:
132856230
NCBI-ProteinID:
XP_060741722
LinkDB
All DBs
Position
13:5618933..5627202
Genome browser
AA seq
404 aa
AA seq
DB search
MEEKQFESQMQHMDSYQHWYEAAHQQFQPEPVPQYHQMVNAFQYQQDVLEYTDLNELSDH
REPAQISQLHQLPVQPPALPLTPEKGKKRGRPPKQGKNDQTDAEVIVKKAKRTLDRFNGM
SVEEVMAKKLPDVITYNLDILIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTEEQLN
YMHDQTLPEKYGIGFTNMVERTTPGSKDLSNKEIREGGKQLLEKLQKYRPRIAAFNGKCI
YETFCKEIFGVKAKNLEFGLQPYRVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKE
LRDQLKGVIQSQDIQETQYTFDVVMAKEDAKKMAIKEEQHDPGYEEGSTSVTQQTCSFSH
ANEPGAEHSAAMGQVESNQWTMQPFTDQIPDIRYSSNTETSQYF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagcagtttgagtctcagatgcagcacatggattcatatcagcactggtac
gaagcagcacatcagcagtttcagccagaaccagttcctcagtaccaccagatggttaac
gcttttcaataccagcaggatgttctagaatatactgatctgaatgaactatcagaccat
agagagccagctcagatcagtcagcttcatcagctgcctgtccagcctccagctcttcct
ttaacacctgagaaagggaagaagcgtggacgaccacccaagcaggggaaaaacgaccaa
accgacgctgaagtcattgtgaaaaaagccaaacgaactctggacaggtttaacggcatg
tctgtagaagaggtcatggccaaaaaactgccagacgtcatcacctacaacctggacatt
ttgataattggtatcaaccccgggttgttgtcagcctataaaggacgacattacccaaat
ccaggaaaccatttttggaagtgcctgttcttatcagggctcacggaggagcaactgaac
tacatgcacgatcagactcttccagaaaaatacggcatcggctttactaatatggtagag
aggactacacctgggagcaaagacctctcaaacaaagagattcgagaaggaggcaaacaa
cttctggaaaagctccagaaatacaggccacgaatcgcagccttcaatgggaaatgtatt
tatgaaacattctgtaaggagatttttggtgtgaaagccaaaaacctggaatttggtctg
cagccctacagagttccagagacagaaacggtttgttacctgatgccatcatccagtcca
cgctgtgctcagttccctcgagctcaggacaaagttcatttctatattaagctgaaggaa
ctccgggaccagctgaagggtgtgattcagagccaggacattcaggagacacagtacacg
ttcgacgtggtcatggccaaagaggatgccaaaaaaatggctatcaaagaagagcagcat
gaccccggctatgaggagggctctactagtgtgacgcagcagacgtgtagcttctctcat
gctaatgaaccaggcgctgaacattctgcagctatgggacaggtcgagtccaaccagtgg
acgatgcagccgttcacagaccagatcccagacattaggtactccagcaacactgagaca
tcacaatatttttga
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