KEGG   Tachysurus vachellii: 132856684
Entry
132856684         CDS       T09596                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
tvc  Tachysurus vachellii
Pathway
tvc04115  p53 signaling pathway
tvc04210  Apoptosis
tvc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    132856684 (apaf1)
   04115 p53 signaling pathway
    132856684 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132856684 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 NB-ARC EIF3I WDR55 APAF1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th NBCH_WD40 CARD Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd RMC1_N Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 PEP5_VPS11_N WD40_like Ge1_WD40 WD40_RFWD3 eIF2A Utp8_b_propeller WDR54 CARD_2 Beta-prop_Nup120_160 Beta-prop_SPT8 AAA_16 Dark_WHD
Other DBs
NCBI-GeneID: 132856684
NCBI-ProteinID: XP_060742325
LinkDB
Position
14:19755904..19811713
AA seq 1260 aa
MEERSLSCLLRFRTVLEQDIKASYLMDHMISDGILTADEEEKIYSKPTRKEQAAALLDVL
LCKDNMAYISFYNALIRESYGDLAGLLHSDLPQLSPEGEKTFFNGISSSVQVILSEGGVP
QRPAVFVNRPDLLKLLREKLQRLQNTPGWVTVFGMAGSGKSVIAAEAMRDRVLIAECFPD
GVHWLSVGQCEKADLLVRMQSLCFRLEQRSEACLRAPSSLEEAKERLRFLMLRRFPRSLL
ILDDVWDSYTLRAFDIQCRVLLTTRNSSLTDSVSGHRFKVPVESGLDDEKALEILALYVN
GKSSQTLPEQARSIVKQCKGSPLVVSLIGALLRDFPERWGYYLEQLRKNKFRRIRKSSSY
DYEALDQAMDASLQVLEDDHRALYKDLSVLEKDIKVPAKVLSVVWGLELEEVEDVLQEFV
NKSLLFRDCNHRPYLYFLHDLQLDFLTEQNHKQLPELHAKVVCQYQEAYRGIPPLSGDVE
GLYWYRFLPHHMARAKMTKELYSLMFSLDWVQNKAQVMGSAHLINDYVEHGDILDKENSE
VRLQFQEFLSLNGHQLEQRPFPDVLQLALAQPHTSEVYRQAFLQAQEKASRGQLYLDWVN
KSSLGSLSRLVLHPHQNSVYYACFSRDGNKIASCGASKSLRVFKSTSGEKVQEFQAHDDE
VLCCAFSPDDRQIATCSSDRKVKIWSLDKGILVRVFDVEHEEQINHCQFTNKNRRILLAT
SSNDKFTNTKVWNMNKQTSQNTMFGHTDGVNHCCFSPDDSYLATSSNDGTLKLFEVTSAN
EWKSIDVTNFFPESDDASVSVKCSTWSVDGKRIIAAAKNTVFVLDVATQDMLLEIRTSRL
STVQYCQACPNSQLLALALSHYTVELWNFETNKKMAECSGHLSWVPCVQFSPDGSLLLSA
SDDQTIRLWETEHVHTSSAVALKRDFDVLFSQDDIMVAAADSRNRLQVRSGPEARVVLET
TTQKSRIRCICICRQKPTVALGMEEGSVQVLEVPSGKTLATLDGHTKTVHHCLFTDEGQT
LITSSEDTTIRVWRWMTEHCLVLKGHEEPVRRFHLLSSSSLSSALLSWSFDGTVKVWDLN
SGEKLQDLKCHQGAVLSGDISPDGHLFITTSADKTAKVWSCSSWSMVFFLQGHKACVRSC
RFSWDSKRLATGDDNGEIRLWSVLNGNLLKICSLEKKDSMDSFHGGWVTDLHFSPDNKVL
VSTGGYIKWWSVDRGEALQTFYTTGNNLKHICVSSDFKTFVTIDNIGILYILKQVERGQL
NT seq 3783 nt   +upstreamnt  +downstreamnt
atggaggagaggtctctcagctgcttgctgcgtttcaggacagtcctggagcaggacatc
aaggcttcctacctgatggaccacatgatcagtgacgggatcctgactgcagatgaggaa
gagaagatctacagtaagcccaccaggaaggagcaggcagcagcactgctggatgtttta
ctgtgtaaagacaacatggcgtacatctccttctacaacgcactgatccgagagagctac
ggagacctggccgggctgcttcacagtgacctgccacagctcagccctgagggggaaaag
accttctttaacggcatctcttcctcggtgcaggtgatcctgagtgaaggaggcgttccc
cagaggcccgcggtgtttgtcaaccgtcccgatctgcttaagctgctccgggagaagctg
cagcggctgcagaacacaccgggatgggtgaccgtgttcggcatggccgggtcagggaag
tccgtgattgccgccgaggccatgagagatcgggtgctgatcgctgagtgttttcctgat
ggagtccactggctgtcagtgggacagtgtgagaaagcagatctcctggtgaggatgcag
tctctgtgctttagactggagcagcgttccgaggcgtgcttaagggcgcccagctccttg
gaggaggccaaagagcgcttgcgcttcctcatgctgcgcaggtttcccaggtctctgttg
atcctggatgatgtgtgggacagttacactctcagggcattcgatatccagtgccgagtt
ctcttaaccactcggaacagcagcctaactgactccgtgagcggtcacaggttcaaggtg
cctgttgagagcgggctggacgacgagaaggctctggaaattctcgctctgtatgtcaat
ggaaaatcttctcagactcttccagagcaggctcgcagcatcgtgaaacaatgcaaaggc
tctcctctggtcgtgtctctgattggagcactgctcagagactttcctgaacgctggggc
tactatctagagcagctgagaaaaaataaattcaggcgaatacgcaagtcttcctcttat
gattacgaggctctggatcaggccatggacgcaagtctgcaggtcctcgaagacgatcac
cgtgcgctctataaagatctgagcgttctggagaaggacatcaaagtgcctgccaaggta
ctgtctgtggtgtggggtctggagctggaggaagtggaagatgttctccaggagtttgtg
aacaaatctctgttgtttcgtgattgtaaccaccggccgtatctctacttcctacacgac
ctgcagctcgacttcctcacagagcagaaccacaaacagctaccggagctgcacgctaaa
gtggtctgtcagtaccaggaagcataccgaggaatcccgcccctttctggagacgtggaa
ggattatactggtatcgtttcttgccgcatcacatggcacgagcgaagatgaccaaggaa
ctttattctctcatgttctcactagactgggtacagaataaggctcaggtgatgggatcc
gcccacttgatcaacgactacgtggagcacggtgacattctcgataaagagaacagcgag
gtgaggctgcagtttcaggagttcttgtctttaaacggccatcagttggagcagaggcct
ttccctgacgtgctgcagctggcgctggctcagccgcacacctccgaggtctacagacag
gcttttctgcaagcgcaggagaaggccagcagggggcagctctacctggattgggtgaac
aagagcagcctggggagtctgtcacggcttgtgctgcatcctcaccagaactctgtgtac
tacgcatgcttctctcgagacggcaacaagatcgcctcctgtggcgccagcaagagtctg
cgggtgtttaagagtacctctggagagaaggtccaggagttccaggctcatgatgatgaa
gttttgtgttgtgctttctcacctgatgaccgccaaatagcaacctgctccagtgacagg
aaggttaagatctggagtttagacaaaggcattctggtgcgtgtgtttgatgttgagcac
gaggagcagattaatcactgccagttcacaaacaagaaccgacgcatcctgctggccacc
agctctaacgacaaattcaccaacaccaaggtgtggaacatgaacaagcagacgtctcag
aacaccatgttcggacacaccgatggtgttaatcactgctgcttctctccagatgactcc
tatcttgctacgtcctcgaatgacggaacactaaagctgtttgaggtgacctccgcaaac
gagtggaagtctatcgacgtcaccaatttctttccagagagcgatgacgcaagcgtttct
gtgaagtgcagcacctggtcagtcgatggcaagcgcatcatcgctgctgcaaagaacaca
gtctttgtattggatgtagcgacacaggacatgttattggagattcgaaccagtcgtctg
agcacagtgcagtactgtcaggcctgtcccaacagtcagctcctagccttagctctgtca
cactacactgtggagctgtggaactttgagactaataagaagatggctgaatgcagtggg
cacctgagctgggtgccttgtgtacagttctctcctgatggctcgctcctcctttcagcc
tctgatgaccagactatcagactgtgggagactgagcatgtgcacacttcttcagctgtt
gctctgaagagagattttgacgttctcttcagtcaggatgacatcatggtggcggcagct
gacagccggaacagattacaggttcgttcgggcccagaggctagagtagtgctggagacc
acgacacagaaatcgaggattcgttgtatctgtatctgcagacagaagcctactgtggcg
ctgggcatggaggagggcagcgtgcaggttctcgaggttccctctggtaaaactttagcc
acacttgatggtcacaccaaaactgtgcaccactgcctcttcactgatgaaggacaaact
ctaatcacatcctcagaggacactacgatcagggtgtggaggtggatgacagaacactgt
ctggtattaaaaggacatgaggagccagttagaaggtttcatcttctgagctcatcctct
ttatcctctgctctgctgtcatggtcatttgatggcactgtgaaggtgtgggatctgaac
tcaggagagaagctccaggacctgaagtgccatcagggtgcagttctgtcaggtgacata
tcccctgatggacatctcttcatcaccacctcagcagacaagacagcaaaggtgtggagc
tgttcatcatggagcatggtgttcttcctgcaaggccacaaagcctgcgtgcgcagctgc
cgcttctcctgggacagcaagcgccttgccactggtgatgacaacggcgagatcaggctc
tggagcgtgttaaatggaaacttgctgaagatctgctccctggagaaaaaggactctatg
gattccttccacggaggctgggtgactgatctgcacttttctcctgataacaaggtcctc
gtgtctactggaggatacatcaagtggtggagtgtggacagaggagaagccctgcagacc
ttctacactacaggaaacaacctgaagcacatctgcgtctcgtccgacttcaaaacattt
gtcaccatcgacaacatcggcatcctgtacatcctgaagcaggtggaacgaggacagctt
tag

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