Tachysurus vachellii: 132858869
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Entry
132858869 CDS
T09596
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
tvc
Tachysurus vachellii
Pathway
tvc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132858869 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132858869 (irf5)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
132858869 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
132858869
NCBI-ProteinID:
XP_060745390
LinkDB
All DBs
Position
16:complement(4610555..4629609)
Genome browser
AA seq
477 aa
AA seq
DB search
MSAQPRRIRLKPWLLAQVNSGKYPGLKWLNKECRLFQIPWRHATRHLPTPEEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFILKYDGTKETPMQPYKLYEVCELPANG
DECDNDEEELPNFAHLSINACITDPPSYPPFLTNQETFPLSIMGPGFSDHSQIAPTVKQE
QHLLREAVLNGHGLGTRVIAPAALAHTVEMPDTMVDSPMPEVRPEVESQVQPCISDLLSS
PHMLPLTDLDIKFQYRGQTVGSMTVSNPQGCRLYSGNLAPTPEQVELFGPITLHQVLFPG
TAGIQNEKQRFYTEHLLDVMDRGLILEIQGQDIYAVRLCQCKVFWSGPGVPDVGQPNPME
RERKINVFSLNNFLQGLIMYQKGEVPTPPPFEIYFCFGEDWPDRKPKEKKLIIVQVVPVV
ARILTEMFSGELSWSTDSIRLQISNPDLKDQTVEQFKELHRLLQNQQAQASWHQNIH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccagccaaggagaatccgtctgaagccatggctgctggcccaggtgaacagt
gggaaatatcctggcctcaaatggctcaataaggagtgccgcttatttcagataccatgg
agacatgccacacgccatctaccgaccccagaggaggaaaacacaatattcaaggcctgg
gcgctggagactgggaaataccaggagggtgtagacgagcctgatccggccaaatggaag
gcaaacctgcgatgtgcactcaacaagagccgtgagtttatactgaagtatgatggtacc
aaggagacaccaatgcagccttacaagctttatgaggtgtgcgaactgccagcaaatgga
gatgagtgtgacaatgatgaggaagagctaccaaattttgcacacctttccattaatgct
tgtatcactgacccgccaagctacccaccattccttaccaaccaagaaacattccctctt
tccatcatgggacctggattttctgatcacagtcaaatcgctcctactgtgaaacaggag
cagcatctactcagggaagctgttctaaatggacatggtctgggcaccagggtcatagca
ccagctgctcttgcccacactgttgagatgccagacaccatggtggacagtcctatgcca
gaggtgaggcctgaagtagagagccaagtgcagccatgcatctctgacctgctgagcagt
cctcatatgctgcccttaacagaccttgacattaagttccagtatcggggacagaccgtg
ggctctatgaccgtgagtaatcctcaaggctgtcggctttattctggtaatttggcacca
acaccagagcaagtggagctgtttgggcccatcacactacaccaggtgctgttccctgga
actgcagggatccaaaatgagaagcagcgcttctacactgagcatctgctagacgtgatg
gaccgtggccttatccttgagatacaaggccaggacatctacgctgtgcgattatgccag
tgcaaagtattttggtccgggccgggagtgcctgatgtgggtcagcctaacccaatggaa
agagagcgcaagatcaatgtgttcagtctcaataacttcctgcagggactcatcatgtac
cagaagggtgaggtgccgactcccccaccgtttgaaatttacttctgctttggggaggat
tggcctgacagaaaacccaaagagaaaaagctcataattgtccaggtcgtgcctgtagtg
gcaaggatcctgactgagatgttctctggcgagctctcatggtccacagacagcatccgc
ctccagatctccaatcctgatcttaaagaccagactgttgagcagttcaaagagctccac
agactcttgcaaaatcaacaggcccaggcctcatggcaccaaaacatccactaa
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integrated database retrieval system
