Tachysurus vachellii: 132860909
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Entry
132860909 CDS
T09596
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
tvc
Tachysurus vachellii
Pathway
tvc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132860909 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132860909 (ldlra)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
132860909 (ldlra)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
Psg1
PAP_PilO
TMEM154
Motif
Other DBs
NCBI-GeneID:
132860909
NCBI-ProteinID:
XP_060748203
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All DBs
Position
18:complement(10409456..10421442)
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AA seq
869 aa
AA seq
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MDKVLFLFFVLYLTCQVQTEDGPCGSRNFQCGNRKCITIRWICDGTDDCGDGTDELPASC
ITKTCKPSEFQCGGRLNQCVPNSWKCDGKADCENGADEVGCAPRHCLNGEFRCTNGQCVS
RAFVCDEDVDCDDGTDEAQCQTTTCSSTAFRCNNSACLPRLWACDGDSDCSDGSDEWPQY
CGHRISPSPSRPCSSMEFHCGTGECIPNPWRCDGDPDCPDRLDEKDCAVSTCQPDEFRCG
DGSCIHGSRQCNQVYDCQDMSDELGCVNATHCEAPSRFQCRSGECISMDKVCDKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPSGFRLVDKKRCEDIDECATGDTC
SQICVNQVGSYKCECAEGYQVDPATKACKAVGTIAYLFFTNRHEVRKMTLDKSEYTQVIS
RQKHIVALDMNIATKELFWSDLSLKKIYRAPIDAALDTSQHSIVIDSDLGAPEGIALDWI
HGNIYWTDSVRGTISVATADGKKRKTLFGKDLTKPRAIVVDPINNFVYWTDWGSPAKIER
GGLNGVDRSTLVSDNIVWPNGITLDLLNQRLYWVDSKLHTLASIDVQGGGRRTLIIDQGR
LAHPLSVTVFEERVFWTDVSNNDILSANRVTGGDITKVAEHLTSPEDIVLFHNLKQPSAV
NWCKINNGGCEFLCLAAPQVSKFSPKYTCACPDNMMLDKDMRKCVPAVPTTAQPIQPRVP
TTDRTHITPHMTPKPSAARTTKTSARIFTTTVKSLQKPTEATRAKTSTVNTHYEVTTQTN
IHIAVAKERKESSTLLTLYIALPFVMLCLLVFGGMLLWRNWKLKNTNTIHFENPVYQKTT
EDKVHICRNYSSDGFSYPPRQVVSLDDEL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggttttatttttgttcttcgtgttgtatttaacctgccaagttcaaacagag
gatggaccctgcggctctaggaatttccagtgtggcaacaggaagtgtattacgataaga
tggatttgtgatggtacagatgattgcggtgatggcactgatgagctccctgcctcctgc
ataacaaagacatgcaaacccagcgagttccaatgtggtggacggctaaaccagtgcgtg
cctaacagctggaaatgtgatgggaaggctgattgtgagaacggagctgatgaagtcggc
tgcgctcccagacattgtctgaatggtgaattccgctgcacaaatggtcagtgtgtgtca
cgggcttttgtctgtgatgaagatgttgactgtgacgacggcaccgatgaagcacagtgt
cagaccactacctgcagctctactgcttttcgatgcaacaactctgcctgcctgccacgc
ctgtgggcctgtgatggagattccgattgttcggatggttcagacgagtggcctcagtac
tgcggccaccgaatttctccatctcccagcaggccctgctccagtatggaattccactgt
ggtactggagagtgtattccaaacccctggagatgtgatggagatcccgactgcccggat
cgactggatgagaaagactgcgccgtatccacatgccagccagatgagtttcgctgtggt
gatggatcatgtatccacgggagccgccaatgtaaccaggtgtacgactgtcaggatatg
agtgatgaactcggctgtgtcaatgcaacccattgtgaagcaccatccaggtttcagtgt
cgtagcggtgaatgcatcagcatggacaaagtttgcgacaagcagcgtgattgtagagat
tggtctgatgagccgctacgtgaatgtgattctaacgagtgtctgtacaacaacggtggc
tgctctcatatctgtaatgacctaaagattggctacgagtgcttgtgccccagtggattc
cgcttggtagacaagaaacgctgtgaggatattgatgagtgtgccacaggggacacctgc
agtcaaatctgtgtgaatcaggtgggcagctacaagtgtgagtgcgctgaaggttaccaa
gtggatccagcaaccaaagcctgcaaagctgttggaactatagcctatctcttcttcact
aatcgccatgaggtgaggaagatgactctggataagagcgagtatacacaagtgatctcc
cgtcagaaacacatagttgctttggacatgaacattgccaccaaggagctcttctggtct
gatctgtccctcaagaaaatttatagagctccaatagacgcagcattagacacatctcag
catagcattgtgattgactctgacttgggtgcacctgaggggattgcactggactggatc
catggtaatatctactggacagacagtgtacgtggcactatctctgtagccacagcagat
ggaaagaagcgcaagacgctctttggaaaagacctgaccaagccaagagctattgtggtg
gacccaattaataattttgtgtactggaccgactggggttcgcctgcaaagattgaaagg
ggaggcctgaatggagttgatcgcagcactttggtgtctgataacattgtctggcccaat
gggataactcttgatcttctgaaccagcgtctgtactgggtggactctaaactgcatact
ctcgccagtattgatgtgcagggaggtggacgtcgtacactcattatagaccagggcaga
ctggcacatcctctaagtgtcacagtgtttgaggagcgagtgttctggactgatgttagc
aacaacgatatcctgagtgctaaccgtgtgacagggggagacatcacaaaagtggctgaa
cacctcacatctccagaggacatcgtgctgtttcacaacctgaagcagcccagtgctgta
aattggtgcaagatcaacaatggtggatgtgagttcctgtgcttggctgcaccacaggtc
agcaaattctcacccaagtacacatgtgcttgccctgacaacatgatgctggacaaagat
atgaggaaatgtgtccctgctgttccaacaacagcacaaccaatccagcccagagttcct
accacagatcgcactcatataaccccacatatgacaccaaaaccatctgctgcaagaacc
accaaaacctcagctcgaatcttcaccactacggtgaagtcactacagaaacctacagaa
gcaaccagagccaaaacctccacagtcaacactcactatgaagtgaccacacaaacaaat
attcacattgctgttgctaaagaaagaaaagaatcttcaacattgctgactctgtacatt
gcattgccctttgtgatgttgtgcctcctggtatttggtggcatgttgctatggaggaac
tggaagctgaagaacaccaacaccatccattttgaaaatccagtctaccagaagaccaca
gaggataaagttcacatttgtaggaactacagctctgatggcttctcctacccaccgagg
caagttgtcagccttgatgatgaattataa
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