Tachysurus vachellii: 132861009
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Entry
132861009 CDS
T09596
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04020
Calcium signaling pathway
tvc04510
Focal adhesion
tvc04540
Gap junction
tvc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132861009 (pdgfbb)
04020 Calcium signaling pathway
132861009 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132861009 (pdgfbb)
04540 Gap junction
132861009 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
132861009 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tvc04052
]
132861009 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132861009 (pdgfbb)
Cytokines and neuropeptides [BR:
tvc04052
]
Cytokines
Growth factors (RTK binding)
132861009 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
132861009 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
132861009
NCBI-ProteinID:
XP_060748321
LinkDB
All DBs
Position
18:8692959..8703689
Genome browser
AA seq
535 aa
AA seq
DB search
MCTGLCWLRALLLAACLCYGGAERDPLPVALAELMKSGSVSSTEGLQLLLLSDSVDDDLE
SDHANNTNNRLPRSLLDAQPAQQAQCKVRTEVMEVTRAMLDRSNANFLLWPPCVEVQRCS
GCCNTKNLKCVAVLTHTRYLQVMKIEYVNMRPVYNKAVVSVNDHVECRCQPAPRPVSRRK
SSSQKQEARERSGKPRYKDELHRRDELKSNQRLKLEDLISHSWLPIENGQDAWSHNKTHH
GKSRGHFLGDGKKYNTSSNNTKSWSSEKLTNPLPNHSKIEDTGLLLHNETRARERAKDVE
IQKNSTINDDRLTNRSLVNGVSPTHIANQIPQQESMEIQCVGHSKCTGSSQAHRNETTSQ
TGTNQNQLHSEAPVGQNNQTRVPKPAEKINQKQGHAFNAETHPSTRIKENETPEMESTRE
VTEETRSTSTLLKERKALEEEKEELLLLHKRLDEEKHKLYLKAQQHRQHEDQNQHQTHHS
PQQTHTTTQQTESRTTSPVKMSTPHTPPRLPARTPKRLRKHRNRISKAVMRAMLM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactgggctctgctggctgcgcgcgctgctgctcgcggcgtgtctgtgctacggc
ggcgcagagagggatcctctcccagtagctctggctgagctgatgaagagcggctctgtc
tcgtccacagaaggtctgcagctgcttctgctctctgactccgtagatgacgatttagag
agcgaccatgccaacaataccaacaatcggctgccacggagccttctggatgctcagcca
gcacagcaagcccagtgtaaggtgaggacagaggtcatggaggtcactcgtgcgatgctg
gaccgaagcaatgctaactttctgctttggccgccatgtgtggaagtgcagagatgctct
ggatgctgcaacacaaaaaaccttaagtgtgtagctgtactcactcacacgcgttatcta
caggtgatgaagattgagtatgtgaacatgcggccagtttacaataaagccgtagtctcg
gttaacgatcatgtggagtgccgctgtcagcctgctcctcgtccagtctcccgcagaaag
tcttcttcgcaaaaacaagaagcaagagaacgctcagggaaacctcgctataaagatgag
cttcaccggagagatgagcttaaatccaaccagaggcttaaactggaggatctgataagc
cacagctggctgcccatagaaaatggacaggatgcctggagccataataagacacaccac
ggaaagagcagaggtcattttcttggagatggaaagaagtataacaccagctctaacaac
acaaagagctggtcttctgagaaactgacaaatcctctgcccaatcacagtaagatagaa
gatacaggtttattactacacaatgaaacaagggcaagagagagagccaaagatgtagaa
atacagaaaaacagtacaataaatgatgataggctgactaatcggtcattagtgaatggg
gtcagccccactcatatagccaatcagattccacagcaggagtcaatggaaatacagtgt
gtaggccacagcaagtgtacagggagcagtcaagcacacagaaatgagacgacttcccaa
acagggaccaaccagaatcaactgcacagtgaagcacctgttggccagaacaatcagact
agggttcctaaacctgcagagaaaatcaatcaaaagcaaggccatgccttcaatgcagaa
acacatcctagtacaaggattaaagaaaatgagaccccagaaatggaaagcactcgagag
gtgacagaagagaccagaagcacgtccactttgctaaaggaaagaaaggctttagaggag
gagaaagaggagctgctgttacttcacaagcgccttgatgaagaaaagcacaaactttac
ctgaaagcacaacaacaccgtcaacacgaggaccaaaaccagcaccagacgcaccacagt
cctcagcaaacccacacaactacacaacagacagaaagcagaacaacttctccagtcaaa
atgtccactcctcacacgcccccccgtctacccgctcgtacaccaaagagattgaggaag
caccgcaaccgcataagcaaggctgtgatgagggccatgcttatgtag
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