Tachysurus vachellii: 132861220
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Entry
132861220 CDS
T09596
Symbol
cbx4
Name
(RefSeq) E3 SUMO-protein ligase CBX4 isoform X1
KO
K11452
E3 SUMO-protein ligase CBX4 [EC:2.3.2.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132861220 (cbx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132861220 (cbx4)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132861220 (cbx4)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132861220 (cbx4)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
132861220 (cbx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
CBX7_C
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
132861220
NCBI-ProteinID:
XP_060748619
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Position
18:10737130..10742871
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AA seq
529 aa
AA seq
DB search
MDLPAVGEHVFAVEGIEKKRIRKGRTEYLVKWRGWSPRYNTWEPEENILDPRLLVAFQNR
ERQEQQMGYRKRGPKPKHLLIQLPAFARRSSILADLQETSVDDENQFKVDSLQMPRSQPQ
HYQLNSKKHHQYQPNSKEIPTEAHTNGKKKHFYQLNSKKHHHYQPDPKMYDQQTTKSKEV
KGHDPSIKGWNLPPALQQKWVRDKDTGSLNKVKDLSMEHKHLLIPAIKEDQTVKTTSKDP
LLSSGISSKMKIIRNKNKNGRIVIVMSKYMDNGVQTSKVKNSDSPETEKPKQTINESING
NAASLVNVTAEEENGESDHTGDSACVTREFVHKVPPKKFELSKAKLNTEAGHRTEQEVNK
IGVSYNPSLQPSNKTSSSPILVVEDAPLQKDSANHHLITRKRNLSEPNKAASDCKKFLGS
RSISAPNPVVLSPQREPIDLHCSGQNTSSLYNYNITDNIPDEPIDLSCGRTRLHTEAPTE
SHFIVDGTSETSEKCEEPVSYFKPFSGNIIITDVTTNCRTVTFKEYVSI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgccgtcggagagcacgtcttcgcggtggagggcatcgagaagaagcgc
atacggaagggtagaaccgaatatctggtgaagtggagaggatggtcaccgagatacaac
acatgggaaccggaggagaacatcctcgacccgcgtcttctagtcgccttccaaaacaga
gagagacaggagcagcagatgggatatcgcaaaagaggacctaaacccaaacatcttctg
atccagttacctgcatttgcacggaggtccagcatccttgctgatctccaagagacatca
gtggatgatgagaaccagttcaaagtagattcacttcagatgccccggtcacagcctcag
cattaccaactcaacagcaaaaaacatcaccagtaccagcccaacagcaaggaaatccca
acagaagctcacaccaatggcaagaagaagcacttctatcagctaaacagcaagaaacac
catcattaccaaccagaccctaagatgtatgaccagcaaaccacaaagtctaaagaggtt
aaagggcatgacccatctattaaaggctggaacctccctccagccttgcaacagaaatgg
gtgcgtgacaaggacactggtagtttgaataaagtgaaagatctgtccatggagcataag
cacctgcttatacccgctatcaaggaagaccaaacagtaaagacaacctcaaaggatccc
ttgctctccagtggcatcagcagtaagatgaagatcatcaggaacaaaaacaaaaatggc
cgaattgtcattgttatgagcaagtacatggataatggggtccagacttccaaagtgaaa
aacagtgattctcctgaaacagagaaaccaaaacaaactataaatgagtctataaatggc
aatgcagccagtcttgtaaacgttacagcagaggaggagaatggtgagtctgatcacaca
ggagacagtgcatgtgttaccagagaatttgttcataaagtgccccccaaaaagtttgag
ctttcaaaagcaaaactgaacactgaggcaggtcacagaacagaacaagaggtgaataag
atcggcgtatcatacaatccttctctgcaaccatccaacaaaactagctcttcacctata
ttagttgtggaagatgcgccattgcagaaggactccgccaatcaccacctcatcactcgt
aaacggaacttgtcagaacctaacaaggctgcaagtgattgtaagaagtttctcggctcc
agaagtatcagtgctcccaatccggtggttctttctcctcagagggaacctatcgacctg
cactgttctggccaaaacaccagcagcctctacaactacaatattaccgacaacattccc
gatgaaccaatcgacttaagctgtgggaggactaggctacatacagaagctcccacagag
tcccatttcatagtggatggcacatctgagacatcagaaaagtgtgaagaaccagttagc
tattttaagccattttcaggtaacatcatcattacggatgtcaccacaaactgtcggact
gtgacctttaaggagtacgtctccatttaa
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