Thalassomonas viridans: SG34_000460
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Entry
SG34_000460 CDS
T08831
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tvd
Thalassomonas viridans
Pathway
tvd01501
beta-Lactam resistance
tvd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SG34_000460
01503 Cationic antimicrobial peptide (CAMP) resistance
SG34_000460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvd02000
]
SG34_000460
01504 Antimicrobial resistance genes [BR:
tvd01504
]
SG34_000460
Transporters [BR:
tvd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SG34_000460
Antimicrobial resistance genes [BR:
tvd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SG34_000460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF7977
Motif
Other DBs
NCBI-ProteinID:
WDE05458
UniProt:
A0AAF0C964
LinkDB
All DBs
Position
94441..97539
Genome browser
AA seq
1032 aa
AA seq
DB search
MHQVNQPGQEKTSVMDIFVHRPVVALVLSIVICLAGLWAVTKIPVLQFPKIESSSLVIST
NYTGASASVVQGFVSEPIERVAASVPGVEYVDSVTNSGHSTVTAWLKLNENSTHALAELN
ARLSQIRFELPPGAEDPVVSVSRTDRPFAVFYLNVHAKDISRSELTDYLTRQVNPIINGI
EGVQRVGVEGARTPAMRVWLDADRLSVFNLSAEEVYNALAANNTIATLGYSENNRQRIDI
IANSQLSKVSEFERLVVKKVDDAVVYLKDVAKVELGAEEASVTARLDREDTVYISVWPLP
GANEIAIGDRLYKVLDEVNASLPSGMSIDFAYDGTLYMRDALKEIFSTLTETVILVGLVV
LMLMGSFRSALVPLVTIPISILGAVAAMSAMGFSLNLLTVLAIVLSVGLVVDDAIVVVEN
VARFMRQGMSRTRAALLSSRQLLVPIIAMTLTLAAVYAPIGFLSGLTGVLFKEFAFTLAI
AVIISGIVAITLSPIMSAYVSPRGGEEGWLTAKVNGIFDRVQRRYAEVLARAFHWQGQIF
LVALVVSLLVIPFYLFSAKELAPIEDQSSINVVVQAPPESSLSYNVGEMQQVVADLLQVE
GGTHMWQIVQTSGGFGGLELVSSDERDFRPQQKLPEVYGRLSGIAGLDLLPILPGSLPTA
GQFEIELVVKSSDPYDKMKVYADQLVGAAFQSGKFLFADTDLKIDLPQLELKLNREKIAD
LGMNISAVSDQLGILLSSNYVNRFDANGKAYRVIPIVGDEVRSKPETILDLTLKLPDGEL
IPVSAIAELNWQTGPRKLGTFGQQKSFRVYGGVLPGTTKEEALSTLEAAAAEILPPSYSL
DYAGESRQLRKEGNTLLAVLAVSLLIVYLVLAVQFNSFRDPLVVLLGCVPLALSGALLLP
YIELTTINIYSQIGLITLIGLIAKNGILIVEFANHMQEQGMDKLAAVTEAATTRLRPILM
TTAATVLGHFPLVLVTGAGAEARNSIGIILVAGMLIGTMFTLFVLPAFYLWLATSRDTDK
AADVSLTPEMAA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagttaatcagccggggcaggaaaaaacctcggttatggatatttttgtccac
cgtcccgtggtcgccctggttttgtcgattgttatctgcctggcgggcctgtgggcggtc
accaagatcccggtattgcagtttccgaaaattgaaagttcttccctggtgatcagcact
aactataccggcgcttctgccagcgtggtgcagggttttgtcagcgagccgatcgaaagg
gttgccgccagcgtgcccggggtggaatatgtcgactccgtcaccaactcgggccacagt
acggtaaccgcctggttaaaactcaatgaaaacagcacccatgccctggcggagctgaat
gcgagattaagccagatacgttttgaactgccgccgggagcggaagatcccgtggtgtcg
gtcagccgtaccgaccgtccgtttgcggttttttacctgaatgtccacgccaaagacatc
agccgctccgagctgacggattatctgacccgtcaggttaaccccataatcaacggcatc
gaaggagtgcagagagtgggggtcgaaggggcgcggacgccggccatgcgggtgtggctg
gatgccgatcgcctgtcggtatttaacctcagcgccgaagaggtttataacgccctggcg
gccaacaataccattgccactttgggctacagcgaaaataaccgccagcgtatcgatatt
attgccaacagccagctgtccaaagtcagcgagtttgaacgcctggtggtgaaaaaagtc
gacgatgccgtggtttacctgaaagatgtcgccaaagtggagctgggggcggaagaagcc
agcgttaccgcccgcctggacagggaagatacggtttatatttccgtgtggcccctgccc
ggcgccaatgaaatcgccataggggatcgcttatataaggtactggatgaggtaaacgct
tccctgccttcgggcatgtcgattgattttgcctacgacggcaccttgtatatgcgcgat
gccctgaaagaaattttctccaccctgacggaaaccgtgatcttggtggggctggtggtg
cttatgctgatgggctccttcagaagcgccctggtgcccctggtgactattcctatttcc
attttaggggcggtagccgccatgtcggccatgggcttttccctgaatctgttgaccgtg
ctggccatagtcctgtccgtcggcctggtggtggatgacgccatagtggtggtggaaaat
gtcgcccgctttatgcgccagggcatgtcacggacccgggcggccctgctgagctcgcgc
cagctgctggtgcccattattgccatgaccctgacgctggcggccgtttatgcgccgata
ggtttcctgtccggtttaaccggggtgttgtttaaggagtttgcctttactctggcgatt
gccgtgattatttccgggatagtggccattaccctgtcgccgatcatgagtgcttatgtg
tctcccaggggcggtgaagaaggctggttaaccgctaaggtcaacggtatttttgaccgg
gtgcagcgcaggtatgccgaggtactggcgcgggcattccactggcaggggcagattttc
ctggtggccctggtggtttccctgctggtgatccctttttatctgttttccgccaaagag
ctggcgccgattgaagatcaaagcagcatcaatgtcgtagtgcaggcgccgcccgagtcg
tccctgagctacaatgtcggcgaaatgcagcaggtggttgccgatctgctgcaggtggaa
ggcggtacccatatgtggcagatcgtccagacttccggcggcttcggcgggctggagctg
gtgtccagcgacgagcgggatttcaggccgcagcaaaaactgccggaagtgtatggccgc
ttatccggtattgccggcttggatttgttgcctattttgccgggatctttgccgacggcg
ggacagtttgagatagagctggtggtgaaatccagcgatccctacgacaaaatgaaagtg
tatgccgaccagctggtgggggccgctttccaaagcggtaagtttttgtttgccgatacc
gatctgaaaatcgacttgccgcagctggagctgaagcttaaccgggaaaaaatcgccgat
ctcggcatgaatatctcggcggtaagcgaccagctgggcattctgttgtccagcaattat
gtcaaccgtttcgatgccaacggcaaggcctaccgggtgatccctatcgtcggcgacgag
gtgcgcagcaaaccggaaaccattttggatctgaccctcaaattgcccgacggcgaactg
atcccggtttccgctattgccgagcttaactggcagacggggccgaggaaactcggcact
ttcgggcagcagaagtcgttccgcgtatacggcggcgtactgcccggcaccaccaaggaa
gaagcgctgtcaaccctggaagccgcggcggcggagattctgccgccttcctacagcctg
gattatgccggcgagtcgcgccagttgaggaaagaaggcaataccctgctggcggtgctg
gcggtttccctgctgatcgtatacctggtgctggcggtgcagttcaacagctttcgggat
cctttggtggtactgctgggttgtgtgccgctggccttatccggcgccctgctgttgcct
tatatcgagctgaccaccatcaatatctattcccaaataggtttgatcactttgatcggc
ctgattgcgaaaaacggtatcctgatcgtggaatttgccaaccatatgcaggaacagggc
atggataagctggcggcggtgaccgaggcggccaccacgcgtctgcgtcctatcctgatg
accacggctgccactgtgctcggccacttccccctggtgctggtaaccggcgccggcgcc
gaagcccgcaacagcataggcattattctggtggcgggtatgctgatcggcactatgttt
accctgttcgtactgccggcgttttatctgtggctggcaacaagtcgggatacggacaag
gcagcagacgtgagtctaacgccggaaatggccgcctag
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