Thalassomonas viridans: SG34_003555
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Entry
SG34_003555 CDS
T08831
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00300
Lysine biosynthesis
tvd00550
Peptidoglycan biosynthesis
tvd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SG34_003555
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SG34_003555
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tvd01011
]
SG34_003555
Enzymes [BR:
tvd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SG34_003555
Peptidoglycan biosynthesis and degradation proteins [BR:
tvd01011
]
Precursor biosynthesis
Amino acid ligase
SG34_003555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WDE06018
UniProt:
A0AAE9Z3R3
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All DBs
Position
807439..808977
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AA seq
512 aa
AA seq
DB search
MPDPNYAIDQALALFDICIDPVATGNLVNDSREIQSGDIFCAVLGTNQDGRQHIEKAVLA
GAKLVISQCQHHLQHGSVIKRTFGDTSVNLVQFYQLDSRLYELARAYYREPQAGMTITGI
TGTNGKTSTSQIIAKLLAAYRQNCAIIGTVGAGTLDALTPIANTTPGPTQLHQLLAGFAA
QDISDVAMEVSSHALTQNRVCPGMLDIAVFTNLSRDHLDYHQTMENYAEAKFSIFTGKAG
QTAIVNGDDVQGREKLAQWPSAQPVIVFGRSEHIKSYDLYLRASQIKADNRGTAFALETH
LGNFEINSPLMGDFNVDNLLAAIAVLVAKGLPLEPLTEAVKTLTPILGRMENISAPGKAT
AVVDYAHTPDALEKALQACRRHCQGQLWLVFGCGGDRDKGKRPEMGKIGEQLADHVVITN
DNPRHEAAELIASDILAGCQKSEKITLILDRAQAVRSVLSRAKAEDMVLLAGKGHEDYII
LGDEKIEYNERELVLDFFSGESGEKDQNESRS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcctaactacgccatagatcaagcgcttgccctgttcgatatttgtattgac
cctgtggccaccggcaacctggtaaacgacagccgggaaattcagtcgggagatatcttt
tgtgcggttctgggcactaaccaggacggccgccagcatatagaaaaagccgttttggcg
ggggccaaactggtgatcagccagtgccagcaccatttgcagcacggcagcgtcatcaag
cgcacgtttggcgatacatccgttaacctggtgcagttttaccagctcgacagccgctta
tatgaactggccagggcctattaccgcgagccgcaggcgggcatgacgattaccggcatt
accggcaccaacggtaaaaccagtaccagccagatcatcgccaagctgctggcggcgtat
cggcaaaactgcgccattatcggcaccgtaggggcgggcactttagatgccctgacaccc
atcgccaataccacgccgggaccgacccagctgcaccagctgctggccggttttgccgcg
caagatatcagcgatgttgctatggaagtgtcttcgcacgccttaacccagaaccgggtt
tgccccggtatgctggatattgcggtatttaccaacctgagccgcgatcatcttgattac
catcaaaccatggaaaactacgccgaggcaaaattttccatctttaccggcaaagccgga
caaaccgccattgttaacggtgatgatgtccaggggcgcgaaaaactggctcagtggcca
tcggcacagccggtgatcgtttttggccgcagcgagcatatcaaaagttatgatttgtac
ctgcgcgcctcacagattaaggcggacaaccggggtacggcttttgccctggaaacgcat
ctgggcaactttgaaattaacagtccgctgatgggagactttaatgtcgataacctgctg
gcggcgatagcggtactggtggcgaaaggtttgccgctggagccgctgacagaagcggtc
aaaacccttacccctatcctcggccgcatggaaaatatcagtgcgccgggcaaggcaacc
gccgtggtggattacgcccatacgccggatgccctggaaaaagccttgcaggcatgccgc
cgccattgccaggggcaattatggctggtgttcggctgcggcggcgaccgggataaaggc
aagcgcccggagatgggcaaaataggggaacagttggcggatcatgtggtgataaccaac
gacaaccccaggcatgaggcggcagaattaatcgccagcgatattttagccggttgccaa
aaatcggaaaagatcaccctgatcctcgaccgggcccaggcggtgcggtcggtattgtcg
cgggccaaagccgaagacatggtactgctggcgggtaagggacatgaagattacatcatt
ttaggtgatgaaaaaatcgaatataacgaacgtgaactggtgctcgactttttctccggg
gagagcggcgaaaaagatcaaaacgaaagccgttcatga
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