Thalassomonas viridans: SG34_005820
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Entry
SG34_005820 CDS
T08831
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tvd
Thalassomonas viridans
Pathway
tvd01501
beta-Lactam resistance
tvd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SG34_005820
01503 Cationic antimicrobial peptide (CAMP) resistance
SG34_005820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvd02000
]
SG34_005820
01504 Antimicrobial resistance genes [BR:
tvd01504
]
SG34_005820
Transporters [BR:
tvd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SG34_005820
Antimicrobial resistance genes [BR:
tvd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SG34_005820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WDE06436
UniProt:
A0AAF0CAE8
LinkDB
All DBs
Position
complement(1345557..1348637)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKLTALSLKNPTAVMVGILLAALFGGISLFKLPVQLTPDISQPKITISTNWRSAAPEEME
AEIIERQEDVLKGLQSLVSLESDSSQGRGSITLRYRTGVNLERALIDVMNALNQVPSYPP
DADEPVIAVGGSSTFTAIAWFALKPLPGNKRDIAFYQDYVEEVIQPRLERVAGISQTNAF
GGLSSELRVTFNPYKAAALGLNVPDLADKLTSNTDSSGGFNDIGRRKYTLRFSGKYGIEQ
LEQMVLEWRDGRPVLLRDIARVEMTFADRTGILTLDGEPAIAMNAQAEQGVNVIQVMQGL
KAAMAELNRGALKHEGLELIQMYDETVYIGRAMTLVQNNLLLGILLAISVLWWFLRKFRA
TLIVAVAIPISIIITVTVMFASGRSLNIISMAGLAFAVGMVLDAAIVVLENIVRLREQGL
PPEKASLQGATQVWGALLASTVTTVAIFLPIAFLEEVSGQLFADLAITIAVAIFASLVIA
VTVLPAAARKLLARVSSKDPHSHWWHNITQAVMLLTATPARRYGWILGLLLFSAAGSYLL
FPKVDYLPKGNQNQFQAFIMPPPGLSYPAARIELSDKVNQRLMPYLTGEKQPKIAHTWMG
FFGSFGFMGGRGENAGDIQKIVQVVNSELLAGFPDTMAFATQAQLFRNLGGGRRIDIDIQ
GNRVDELLQAARIGYGVIQETLPEARIRPVPGLTLAEPELRLIPDERRVAEAGWTRQEVS
AISRALGTGLYVGDFFNGQKRLNVFLRVQQWQTPEELAALPLFTPEAGIQPVGELVELER
TAGPSSIRRINRKRTITLEVTPPGNLSLEEAIARLKTRAEPAILSHLTDNGAIAFRGSAE
ALTEALANMSQSFILALVILYLLMSALFKSFKDSLLVVLTIPLATVGGIGLLQLTNLVIF
QPLDLLTMIGFVILLGLVVNNAILLVYQTRIGEETGLGRHEAVRQAVRLRLRPILMSTLT
SICGMLPLLLIPGAGAELYRGIAAVIVGGMSVSTLFTLLFLPSLLQLGKQSQPQKSHLAT
PSAAGK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgcactttccctgaaaaaccccacggcggttatggtagggatcctgctt
gccgccctgttcggcggcatcagcctgttcaagctgccggtgcagctgaccccggatatc
agccagccgaaaatcactatctccaccaactggcgcagcgccgccccggaagaaatggaa
gcggaaatcatcgaacgccaggaagatgtgttaaaggggctgcaaagcctggtttccctg
gagtccgactcaagccagggcagaggcagcatcaccttgcgctaccgcaccggcgtcaac
ctggagcgggccttaatcgatgtgatgaatgccctgaaccaggtgcccagctaccctccc
gacgccgacgagccggtgatcgccgtcggcggcagcagcacctttaccgccatcgcctgg
tttgccctcaagcccttgcccggcaacaagcgggatatcgccttttaccaggattatgtc
gaagaagtgatccagccccggctggagcgggtggcggggatctcgcaaaccaatgccttc
ggcggcctgtccagcgaattaagggttacctttaatccctataaagccgcggccttgggg
ttaaacgtcccagacctggcagacaagctcaccagcaacaccgacagctcaggcggcttt
aacgacatcggcaggcgaaaatataccctgaggttttccggaaaatacggcatagaacaa
ctggaacaaatggtgctggaatggcgcgacggccgaccggtactgctcagggacatcgcc
cgggtggaaatgaccttcgccgacagaaccggcatattaaccctggacggcgaaccggca
atagccatgaatgcccaggcggaacagggggtaaacgttatccaggtgatgcagggcctt
aaggcggccatggcggaattaaaccgcggagccctgaaacacgaaggcctggagcttatc
cagatgtatgacgaaaccgtctatatcggccgcgccatgaccctggtccagaacaacctg
ctgctgggcatcctgctcgccatcagtgtcctgtggtggttcctgcgtaaattccgcgcc
accttgatcgtcgccgtcgccattcccatttccatcatcatcacagtcacggtgatgttt
gccagcgggcgtagcctgaatattatttccatggccgggctggcctttgccgtcggcatg
gtgctggatgccgccattgtcgtgctggaaaacatagtgcgcttacgggagcagggactg
cccccggaaaaggcctcgttgcagggggcaacccaggtttggggggccttgctggcctcg
acggtcacaacagtagccattttcctgccgatagctttccttgaggaggtttcgggccag
ttgtttgccgatctggccatcaccatagccgtggctatctttgcttccctggtgatcgcc
gttaccgtcttgccggctgccgcacgcaaattgctggcccgggtatcaagcaaagatccc
catagccattggtggcacaatatcacccaggccgtgatgctgctgaccgccaccccggcc
aggcgctatggctggatcctggggttattgcttttttccgctgccggcagttatctgctg
tttccgaaagtggattacctgcctaaaggaaaccagaaccagttccaggcctttattatg
ccgccgccgggcctgagctacccggcggcacgcatcgaactaagcgacaaggtcaaccag
aggctgatgccttatctcaccggcgaaaaacagccgaaaatagcccatacctggatgggt
tttttcggcagcttcggctttatggggggacgcggcgaaaatgccggcgacatccagaaa
atcgtccaggtagtcaacagcgaattactggcaggttttcccgataccatggcctttgcc
acccaggcgcagttattccgtaacctggggggcggccggcgcatagatatcgatatccag
ggcaaccgggtggatgagttattgcaggcggcgcgcatcggctacggcgtgatccaggaa
accttacctgaagcgcgaatccggccggtacccgggctgaccctggcagaacccgaactg
cgcctgatccccgatgagcggcgggtggctgaagccggctggacccggcaagaggtttcg
gcgatttcgcgtgccttaggcacaggtttgtacgtcggggatttttttaacggccagaaa
cgcctgaatgtttttttgcgggtacagcaatggcagacgccggaagagctggccgccctg
cccttatttaccccagaagccggcatacagcctgtgggggagctggtggaactcgaacgt
accgccggacccagctctatccggcgcatcaaccgcaaacgcaccattaccctggaagtc
accccgccgggcaatttaagcctggaagaagccattgccaggctcaaaacccgggcagag
ccggcgatactgtcacacctgaccgacaatggcgccatcgcgtttcgcggcagtgccgag
gccctgacagaagccctggccaatatgagccagagttttatcctggcgctggtgatcctt
tatttgttgatgtccgccttgttcaaatcctttaaagatagcttgctggtcgtgctgacc
atacccctggccaccgtcggcggcataggcctattgcagttaacgaatctggtgatcttc
cagccgctggatctcttaaccatgataggttttgtgatcttgctgggcctggtggtcaat
aatgccatcttgctggtctaccagacccgtattggcgaggaaacgggcctgggccgtcac
gaggcggtaaggcaggcggtgcgtctacggctacgccctatcctgatgagcaccttaacc
agcatttgcggcatgttgccgctgttactgatccccggcgccggcgccgaactctaccgg
ggtattgccgcggttatcgtcggcggcatgagcgtcagcaccctgtttaccctgttgttt
ttacccagtttgttacagctgggcaagcaatcgcagccgcaaaagtcccatctggcaacg
ccttccgccgccggcaaataa
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