Thalassomonas viridans: SG34_008800
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Entry
SG34_008800 CDS
T08831
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG34_008800 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvd03400
]
SG34_008800 (nth)
Enzymes [BR:
tvd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SG34_008800 (nth)
DNA repair and recombination proteins [BR:
tvd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SG34_008800 (nth)
Prokaryotic type
SG34_008800 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WDE06970
UniProt:
A0AAE9Z5D6
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All DBs
Position
complement(1955270..1955905)
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AA seq
211 aa
AA seq
DB search
MNKEKRLEILTRLRDDNPHPTTELNFSSPFELLIAVLLSAQATDVGVNKATDKLFPVANT
PQAILDLGLEGLKSYIKTIGLFNTKAVNTMKTCQMLVDLHGGEVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDLVEQKLLKVVPKEFKVDVHHWLI
LHGRYTCVARKPKCGSCIIEDLCEFKEKTEL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgcctggaaatactgacccggttgcgggacgacaatccccacccc
accactgagctgaatttctccagcccgttcgaattgctgattgcggtattattgtcggca
caggcaaccgatgtcggcgtcaacaaagccaccgacaagttattcccggtagccaatacc
ccccaggcgattttagatctcggcctggaaggactgaaatcctacatcaaaaccataggc
ctgtttaataccaaggcagtcaacaccatgaaaacctgccagatgctggtggacttacac
ggcggcgaagtaccggaaaaccgcgaagcgctcgaagccctgcccggtgtcggccgaaag
accgccaacgtcgtgttaaacaccgcctttggctggccgaccatagccgtggatacccat
atattcagggtcagcaaccgcactaaattcgccatgggaaaaaatgtcgacctggtagag
cagaagctgctgaaagtggtgccgaaagaattcaaagtggatgtgcaccactggctgata
ttacacggcagatatacctgcgttgcccgcaagcccaagtgcggctcctgcattatcgaa
gacttgtgcgaatttaaagaaaaaaccgaactttaa
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