Trichophyton verrucosum: TRV_01070
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Entry
TRV_01070 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tve
Trichophyton verrucosum
Pathway
tve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRV_01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tve03041
]
TRV_01070
Spliceosome [BR:
tve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRV_01070
Complex C
U5 SnRNP specific factors
TRV_01070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
DUF5505
SRPRB
Motif
Other DBs
NCBI-GeneID:
9580278
NCBI-ProteinID:
XP_003024788
UniProt:
D4D1W8
LinkDB
All DBs
AA seq
985 aa
AA seq
DB search
MDDLYDEFGNYIGGEESEEESQHGGVEAQQFDYDLESEVEAPAAHGQELMEIDDQGPSNA
VILHEDKQYYPTAQQVYGADVETKVQEEDTQPLSQPIIAPVQQKKFAVQEADLPPVFYSR
EFMTDLLNYPSQTRNIALAGHLHHGKTAFMDTLVMETHDLSEKLDKRTGKSKDEQLRYTD
VHFLERERGLSIKSAPMSLVLQGTKGKSHLFNIVDTPGHVNFVDEVAASLRLVDGVVLVV
DVVEGVQINTEQIIKHAVLEDLPLTLIVNKLDRLILELKLPPTDAYFKLKHVVEEVNTVI
ERTIPGQGEKRRLSPEKGNVAFACASMNWCFTLQSFAKMYADTYAKVDLSEFAIRLWGDI
LFNPRSRKFTRKGMEEQSKRSFVHFILEPIYKLYSHTISESPEDLKDTLATLGINLKPSQ
LKSDAKVLLKLVCAQFFGPVTGFVDMVVQHIPSPVDGASKKLDRYYTGPRDTKVAAAMEA
CDQDGPLVVHVTKLYGTPDAAGFNAFGRIMSGTARAGQQVRVLGEGYTVDDNEDMVVATI
SDTFIAESRYNIPTSGVPAGNWVLLSGVDNSIIKTATLVSLKLEDDEEAYIFKPIKHMTE
SVFKVAVEPINPSELPKMLEGLRKVNKSYPLISTRVEESGEHIVLGTGELYMDCVLHDLR
RLYAEMELKVSDPVTRFCETVVETSAIMCYSVTANTKNKITMIAEPLDDGISEDIESGRV
NIHDPIRKVGQFFEEKYDWDKLAARSIWAFGPDDMGPNILQDDTLPSKVDKKLLGSVRDF
IRQAFSWGTREGPLCEEPIRNTKFRLTDIQLADQAFSRGGGQIIPATRRVIYSSFLMASP
RLMEPIYTCAMTGPPDSVAAIYTVLSRRRGHVLSDGPIAGTPLYSVRGLIPVIDSFGFET
DLRIHTQGQATVSLVFDKWSVVPGDPLDRDIKLRPLEMASPMATARDFVLKTRRRKGLAE
DITVSKFLEPELWKGLKESGILGET
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctttatgacgagttcggcaattatattggaggtgaagagtccgaggaagaa
tcgcaacatggcggcgttgaggcacagcaatttgattatgaccttgaatcggaagtggaa
gccccggctgctcatggccaggagctcatggagatagatgaccaaggtccatcgaatgca
gtgattcttcacgaagacaagcaatattacccaaccgcacaacaagtttacggcgcagat
gtcgagacgaaagtacaagaagaagatacacaaccactgtcacaaccaattatcgcgcca
gttcagcagaagaagtttgctgtccaggaagcagatctaccaccggtcttttactctaga
gagttcatgacagatctattaaactaccctagccaaactcgaaatatagcattggccggt
catttgcatcatggaaagacagcctttatggatacattggttatggagacgcacgatctg
tcggaaaaacttgataaacgaactggtaaatctaaggatgaacagctgagatacacagat
gtgcactttctagagagagagcgtggactgtcgataaaatcagcaccgatgagccttgtt
ttacaaggtacgaaagggaaatctcatctcttcaacatagtagatacccccgggcatgtc
aatttcgtggatgaagtcgccgcgtcattgcgactggtagacggagtagtgcttgttgtg
gatgtggttgaaggtgtccagatcaacacagagcaaatcatcaagcacgcggtattagaa
gacttaccactcactctaattgttaacaagctcgaccgacttatactggagttaaaacta
ccgccaacagatgcctacttcaagctgaaacatgtggttgaggaggtaaacactgtcatc
gagagaacaatacctgggcaaggggaaaagagacggctaagccccgagaagggcaacgtt
gcatttgcatgtgcctcgatgaactggtgttttaccctccagtcattcgcaaaaatgtac
gcggacacatatgcgaaagttgatctctccgagtttgctataagactatggggtgatata
ttattcaatcctcgcagccgcaagtttacgcgcaagggtatggaagaacaatcgaagcga
tcctttgtccatttcatccttgaacccatctacaagctttattcccataccatcagtgag
agcccggaagacctgaaagataccctcgcaacgcttggaatcaacttaaaaccatcccaa
ctgaaatccgatgcaaaggtgctcttaaaactagtttgtgcccagttctttggccctgtt
actgggtttgttgatatggtcgttcagcacatcccttctcctgttgacggggctagcaaa
aaactggataggtactatactgggccaagggatacaaaagttgcggctgccatggaagcc
tgtgatcaagatggtccattagttgtgcatgtcactaagttgtatggaacaccagatgct
gctgggttcaatgcctttgggcgcatcatgagcggaactgcaagggcaggacagcaggtc
agagtactaggagaagggtatacagtggatgataatgaggatatggtcgttgcaaccatt
tctgacacgttcatcgccgagtcccgatataacattcctaccagtggcgtcccagcgggt
aactgggtgctcctcagcggagtagataactccatcatcaaaactgcaactcttgtttct
ttgaaacttgaagatgacgaggaagcatatatatttaagcctatcaagcatatgacagag
tctgtgttcaaggtggctgttgaacccataaatccatcagagctacctaagatgctcgag
ggacttcggaaggttaacaaaagctatcctctgatatctacaagagttgaggaatcaggt
gaacacattgtactgggcactggggagctttacatggattgtgttctgcacgacctccgt
cgactatacgcggaaatggaacttaaggtatcggacccggttacaagattttgtgaaacc
gtggttgagacctctgccattatgtgctattccgtcacagccaacaccaagaataaaatc
acgatgattgcagaacctctcgatgatggtatcagtgaagatatcgagagtggtcgtgtc
aacattcacgatccaattcgaaaagtcggtcaattctttgaagaaaaatatgattgggat
aaactagccgcaaggagtatttgggcttttggccctgacgatatgggaccaaatattctt
caggacgacacattgccttctaaggtagacaagaaactacttgggtcagtacgggacttt
atccgccaggctttcagctggggaacgagagagggtcccttgtgtgaagaacccattcga
aacaccaagttccgtcttacagatatccaactagccgatcaagccttttctcgaggcggt
gggcagatcatcccggccactcgtcgtgtcatctactcgtcattcctcatggcatctccc
cgattgatggaacccatttatacctgtgctatgacaggtcctccagactcagtcgccgcc
atatacactgtcctctctcgtcgacgtgggcacgtcttatccgatggtcctatcgcagga
actcctctttattctgttcgaggacttattcccgtcattgactccttcggttttgagacc
gacctcagaatccatacccagggtcaggcaactgtcagtttagtatttgacaaatggagt
gttgtgccgggagacccattggacagagatatcaaactccggccgctggagatggcaagt
cccatggcaactgcaagagactttgttctcaaaactcgccgaagaaagggtcttgcagaa
gatatcaccgttagcaagtttttggaaccggagctttggaaaggtttgaaggagagcggt
atcctcggcgaaacatga
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