Trichophyton verrucosum: TRV_05409
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Entry
TRV_05409 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tve
Trichophyton verrucosum
Pathway
tve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRV_05409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tve03019
]
TRV_05409
Messenger RNA biogenesis [BR:
tve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRV_05409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_15
AAA_23
RsgA_GTPase
ORC-CDC6-like
Dynamin_N
AAA_25
AAA_28
FtsK_SpoIIIE
DUF87
AAA_27
Zeta_toxin
AAA_22
MMR_HSR1
AAA_16
DUF3584
AAA_10
Motif
Other DBs
NCBI-GeneID:
9584241
NCBI-ProteinID:
XP_003020515
UniProt:
D4DE45
LinkDB
All DBs
AA seq
269 aa
AA seq
DB search
MASADNTPSTDININNLSYKFPDGSTGLSDITIDLPQNSRTLLIGANGAGKSTLLRLLSG
KRLAPNGSIVIGGVDPFKEGLEGVTYLGTEWVLNPIVRTDIDVPTLLASVGGDYYTERRD
ELVDILDIDMSWHMHAVSDGERRRVQLAMGLLRPWNLLLLDEITVDLDLLSRSNFLDFLK
RETERRPCTIVYATHILDNLAQWPTHLVHMHMGHVRDWGSMEKFYSNRPRMSENSQLGEL
VLEWLRKDMKERGPRPGRPAEAKEDIRDE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgccgacaacaccccgagtaccgatataaatatcaacaacctgagctacaag
ttccccgatggctcgacaggactgtcagatatcactatcgacctccctcagaacagtcga
acactcttgattggcgccaatggtgccggaaaaagtacgctcctcaggctcctttcaggc
aaacgccttgcaccaaacggttccatcgtcattggtggagtcgacccgttcaaagaaggc
ctcgaaggtgtcacatacctaggaaccgaatgggttctcaaccctatcgttcgaaccgat
atcgatgtgccgactttactcgcgtctgtgggtggagactactatacggaacgaagagac
gagttggttgatatccttgacatcgacatgtcatggcacatgcatgctgtgtccgatgga
gagagacgacgtgtgcagcttgccatgggcctgctgaggccctggaacctcctcctgcta
gacgaaatcactgttgacctggatctactcagccgaagcaacttcttggatttcttgaaa
cgagaaactgaaaggaggccttgcactattgtttatgccacccatattctggacaacctc
gctcaatggcctacgcatctggtacatatgcacatgggccatgtaagggactggggttct
atggaaaagttctatagcaaccggcctcgcatgtcggagaacagtcagcttggcgaactg
gtgctggaatggctaaggaaggatatgaaggagcgtggtcctcgacccggaagaccagca
gaggcgaaggaggacatcagagatgaatga
DBGET
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