Thiocystis violascens: Thivi_2799
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Entry
Thivi_2799 CDS
T02138
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tvi
Thiocystis violascens
Pathway
tvi01501
beta-Lactam resistance
tvi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Thivi_2799
01503 Cationic antimicrobial peptide (CAMP) resistance
Thivi_2799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvi03036
]
Thivi_2799
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvi02000
]
Thivi_2799
01504 Antimicrobial resistance genes [BR:
tvi01504
]
Thivi_2799
Chromosome and associated proteins [BR:
tvi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Thivi_2799
Transporters [BR:
tvi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Thivi_2799
Antimicrobial resistance genes [BR:
tvi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Thivi_2799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
HH_EMRA
HH_AAEA_pHBA
CzcB_C
Beta-barrel_RND_2
BSH_CzcB
ArAE_2_N
ATG14
Motif
Other DBs
NCBI-ProteinID:
AFL74717
UniProt:
I3YCJ9
LinkDB
All DBs
Position
complement(3071132..3072334)
Genome browser
AA seq
400 aa
AA seq
DB search
MPTHSPDSAFQARRSVPDAGSRGGWPVRFLVAGIALTFLGCGKPEPAATPQMPPPAVVAV
AAKSQAIEDEARFVGRVVAVNRVELRARVEGFLKERRFTEGDPVAVGDVLFLIEPEQYEA
VVEQRQADVTKAQADAQNAEAQLKRGQELLTQKNIAQAKVDELQAAASVAKASIAQAKAA
LTAAQLDLSYTRITAPVAGRIGLAQYTIGNLVSPSSGVLATIVSRDPMYVQFPLTQRELL
QARRDVKERGMDSKNVVVKVRLPDKTLYEHPGRLDFVDVTTDAGTDSVILRAALPNPDGL
LVDGQYVGLVLESGEPKSAILIPQSAMQIDQQGVYVLIVDGESKAQVRRVETGPVKGANI
AVTKGLEEGELVIAEGIQKVRPGQVVKAAPAQAPNEGAAP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccaactcattcccccgattcggctttccaggcgcggcggtccgtcccggacgcaggt
tctcgcggcggctggcccgtgcgctttctggtggccgggatcgcgctgacgttcctcggt
tgcgggaagcccgagccggccgccaccccgcagatgccgcccccggcggtggtcgcggtc
gcggccaagtcgcaggccatcgaggacgaggcgcgcttcgtcggccgggtggtggcggtg
aaccgggtcgagctgcgcgcgcgggtggaggggtttctgaaggagcgccggtttaccgag
ggcgatccggtcgcggtgggcgatgtcctcttcctgatcgagccggaacaatacgaggcc
gtcgtggagcagcgtcaggcggacgtgacgaaggcccaggccgacgcgcagaacgccgag
gcccagctcaagcgcggccaggaactgctgacgcagaagaatatcgcccaggccaaggtc
gacgaattgcaggcggcggcctccgtcgccaaggcgagcatcgcccaggccaaggccgcg
ctcacggcggcccaactggatctgagctatacccggatcacggccccggttgccggacgg
atcggtctggcgcaatacaccatcggcaatctggtcagtccctcctccggggtgctggcg
accatcgtcagccgcgatccgatgtatgttcaatttcccctgacgcaacgtgaactgctc
caggcgcgacgcgatgtcaaggagcggggtatggacagcaagaacgtcgtggtgaaggtc
cgtctgcccgacaagacgctgtacgagcatccgggacgcctggatttcgtcgatgtcacc
accgacgcggggaccgactcggtgatcctgcgcgccgcgttgcccaatcccgacggcttg
ctggttgacggtcagtacgtgggtctggtgctcgaaagcggcgagcccaagtcggcgatc
ctgatccctcagtcggcgatgcagatcgaccagcagggcgtctatgttctgatcgtcgat
ggcgagagcaaggcgcaggtgcgccgcgtcgagaccggtccggtcaagggggcgaacatc
gccgtgaccaagggacttgaggagggcgagttagtcatcgccgagggcatccagaaggtg
cgtcctggccaggtggtcaaggccgcgccggcgcaggcgccgaacgagggcgcggcgcca
tga
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