KEGG   Thiocystis violascens: Thivi_3372
Entry
Thivi_3372        CDS       T02138                                 
Name
(GenBank) endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
tvi  Thiocystis violascens
Pathway
tvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Thivi_3372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvi03400]
    Thivi_3372
Enzymes [BR:tvi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Thivi_3372
DNA repair and recombination proteins [BR:tvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Thivi_3372
 Prokaryotic type
     Thivi_3372
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 HHH_5
Other DBs
NCBI-ProteinID: AFL75242
UniProt: I3YE24
LinkDB
Position
complement(3687468..3688172)
AA seq 234 aa
MVGVADHGSFESHRTTERDTIQAMNKEKRHRIFERLRNANPAPTTELMYETPFELLIAVI
LSAQATDRSVNKATASLFPLARTPAEILALGEEGLKSHIRTIGLFNSKARNILKTCAILI
AEHGGEVPRERKALEALPGVGRKTANVILNTAFGEPTIAVDTHIFRVANRTRLAEGKTPL
AVEQQLLRHVPKPFQKDAHHWLILHGRYVCVARTPHCPHCIIADLCEFPDKRPD
NT seq 705 nt   +upstreamnt  +downstreamnt
atggtcggtgttgccgatcacggatcgttcgagtcgcatcgcacgacagagcgagacaca
attcaagcaatgaataaagaaaaacgccaccgaatctttgagcgtctgcgcaacgccaac
cccgcgcccaccaccgaactgatgtatgagacgcccttcgagttactgatcgcggtcatc
ctctcggctcaggcgaccgacaggagcgtcaacaaagccacggccagcctctttccgctc
gcccggactcccgcggagatcctggcgctcggcgaggagggactcaagtcgcacatccgc
accatcgggctcttcaacagcaaggcccggaatatcctcaagacctgcgccatcctgatc
gccgagcatggcggcgaggtgccgcgcgagcgcaaggcgctggaggcgctgcctggagtc
ggtcgcaagaccgcgaatgtgatcttgaatacggcgttcggcgaaccgaccatcgccgtg
gatacgcatatctttcgagtggccaaccggacccggctcgccgaaggcaagaccccgctg
gcggtcgaacagcaattgctgcggcatgtcccaaagcccttccagaaagacgcccaccat
tggctgatcctgcacggtcgctatgtctgtgtcgcccgcacgccgcattgtccgcattgc
atcattgccgatctgtgcgagtttccggacaaaaggccggattga

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