Trinickia violacea: FAZ95_28050
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Entry
FAZ95_28050 CDS
T09503
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tvl
Trinickia violacea
Pathway
tvl01501
beta-Lactam resistance
tvl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAZ95_28050
01503 Cationic antimicrobial peptide (CAMP) resistance
FAZ95_28050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvl03036
]
FAZ95_28050
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_28050
01504 Antimicrobial resistance genes [BR:
tvl01504
]
FAZ95_28050
Chromosome and associated proteins [BR:
tvl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FAZ95_28050
Transporters [BR:
tvl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FAZ95_28050
Antimicrobial resistance genes [BR:
tvl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FAZ95_28050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
YknX_C
BSH_CzcB
RND-MFP_C
BSH_CusB
BSH_YhbJ
Biotin_lipoyl
Beta-barrel_RND
HH_AAEA_pHBA
HH_YBHG
HH_CzcB
BST2
DUF2118
Motif
Other DBs
NCBI-ProteinID:
QCP52959
UniProt:
A0A4P8J389
LinkDB
All DBs
Position
2:complement(1328751..1329929)
Genome browser
AA seq
392 aa
AA seq
DB search
MSSEPTSRSSLPQRQLTVAAMAGTAVAIVIVAAGAAVRVKDAHQLKNWTEAQAVPTVSWI
APARPASGGLLDLPGRLEAFTDAPIYARVSGYLKSWRVDIGDRVKAGEELAVIDTPELDQ
QLNQAKADLASAQADASLAKTTADRWQALLDSDSVSRQEVDDRTQDYAAKKARVVAAQAN
VERLVATKAFAKIAAPFDGVITARNTDIGALINAGSGSEAQLFSVSNVDKLRVYVHVPQD
YAPMVKPGDTATFNVPEYPGKRFTAKVAGLADSVSAASGTTLVQLMVDNPGHLLLPGSFV
NLHFALPVQAGALRVPASALIFDNRGLRIATIDDHDNVRFKPVAIERDLGSAVEIGSGLT
ASDRVIDTPPDGLAEGDPVRVASAGSKAAKHE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaacccacatcgcgctcttctctgccgcaacgtcaactcaccgtcgccgcg
atggcagggaccgccgtcgccatcgtcatcgtggccgcgggcgccgcggtgcgcgtgaaa
gatgcgcaccagctcaagaactggaccgaggcgcaagcggtgccgaccgtgagctggatc
gctccggccaggcccgcatcgggcggcctgctcgatctgcccggacgtctcgaggcgttt
acggacgcgcccatctatgcgcgcgtcagcggctatttgaaatcatggcgcgtcgatatc
ggcgaccgcgtcaaggccggagaagaactcgccgtcatcgatacgccggaactcgaccag
cagttgaatcaggcgaaagccgacctcgcgagcgcacaagccgacgcgtccctcgcgaaa
acgaccgccgaccgctggcaggccctgctcgactccgactcggtctcgcgccaggaggtc
gacgaccgcacacaagactatgcagccaaaaaggcgcgcgtcgtcgcggcacaggcgaac
gtcgagcgtctcgttgccacgaaagccttcgcgaagatcgccgcgccgttcgacggcgtg
atcaccgcgcgcaacaccgacatcggcgcgttgatcaacgcgggcagcggcagcgaggcg
cagctcttttccgtatcgaacgtggacaagctgcgcgtttacgtgcacgtgccgcaggat
tacgcaccgatggtcaagcctggcgacaccgcgacgttcaacgtccccgagtaccccggc
aagcgcttcacggcgaaggtcgccggtctcgccgattcggtcagcgcggcatcgggaacg
acgctcgttcaattgatggtcgacaaccccggccacctgctgctgccgggcagcttcgtc
aatctgcactttgcgctgccggtacaggccggcgcattgcgggtgcccgcaagcgcgctg
atattcgacaatcgcgggctgcgcatcgcgacgatcgacgaccatgacaacgtgcgattc
aagcctgtcgcgatcgagcgggacttgggcagtgcggtggagatcggctcgggattgacg
gcgagcgaccgcgtcatcgacacgccgcccgacggcctcgccgaaggcgatcctgtccgc
gtcgcgagtgccggcagcaaggcagcgaaacatgaataa
DBGET
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