KEGG   Trichosurus vulpecula (common brushtail): 118828717
Entry
118828717         CDS       T10126                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04060  Cytokine-cytokine receptor interaction
tvp04061  Viral protein interaction with cytokine and cytokine receptor
tvp04062  Chemokine signaling pathway
tvp04064  NF-kappa B signaling pathway
tvp04360  Axon guidance
tvp04670  Leukocyte transendothelial migration
tvp04672  Intestinal immune network for IgA production
tvp04810  Regulation of actin cytoskeleton
tvp05163  Human cytomegalovirus infection
tvp05200  Pathways in cancer
tvp05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    118828717 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    118828717 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    118828717 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118828717 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    118828717 (CXCL12)
   04672 Intestinal immune network for IgA production
    118828717 (CXCL12)
   04062 Chemokine signaling pathway
    118828717 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    118828717 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118828717 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    118828717 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    118828717 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:tvp04052]
    118828717 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:tvp00536]
    118828717 (CXCL12)
Cytokines and neuropeptides [BR:tvp04052]
 Cytokines
  Chemokines
   118828717 (CXCL12)
Glycosaminoglycan binding proteins [BR:tvp00536]
 Heparan sulfate / Heparin
  Chemokines
   118828717 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 118828717
NCBI-ProteinID: XP_036591450
LinkDB
Position
8:46760578..46782778
AA seq 93 aa
MDMKVVALVTLLVATLVLSEGKPVSLSYRCPCRFTESNVAKANIKHLKILNTPNCALQIV
AKLKSSSRQVCIDPKLKWIQEYLEKALNKRFKM
NT seq 282 nt   +upstreamnt  +downstreamnt
atggacatgaaagtggtcgccctggtgaccttgctggtggcaacacttgtgctctccgag
ggaaaaccggtcagtctgagttacagatgtccctgccgattcacagagagcaacgtagcc
aaagccaacatcaagcatctcaaaatcctcaacacacccaactgtgctctccagatcgtg
gcaaagctgaagagcagcagcagacaagtatgcattgatcctaaattaaaatggattcaa
gaatacctggaaaaagctttaaacaagaggttcaagatgtaa

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