Trichosurus vulpecula (common brushtail): 118832678
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Entry
118832678 CDS
T10126
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04140
Autophagy - animal
tvp05014
Amyotrophic lateral sclerosis
tvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118832678 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118832678 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
118832678 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118832678 (SMCR8)
Membrane trafficking [BR:
tvp04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
118832678 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
118832678
NCBI-ProteinID:
XP_036595908
LinkDB
All DBs
Position
1:500479307..500489289
Genome browser
AA seq
940 aa
AA seq
DB search
MISAPDVVAFTKEEEYEEEPYNEPALPEEYSVPLFPFANQGTNPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPDDTKVFGTFDLNYFSLRIMSVDYQASFVGHPSGCAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEHKIMQQFQELSAEFSKAS
ECLKKGNRKAFANELEKKLKDLDYTRTVLHTETEIQKKASDKWFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKASDCYPCEPECAQDQSADQASTTSNPDEPAERNLYRRR
TSYTPKLIKAKSAKCFDKKLKTLEELCDTEFFTQTLAQLNHIEHMFRGDLCYLLTSQIDR
ALLKQQCITNFLFEDLVILDDKVVEKQDNTPMEYSQDKLHSRSLEDCPIPKVLINVGSFK
SSVESVLIKMEQEVGDEFKESEVTESSIYDHQENLDYLDMDMKGSISSGESIEVLGTEKS
ASVLSKSDSQASLTVPLSPQVVRSKAVSRRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEEPYVEEPYADDDEGAIHFSASVSQQDLGETEGSSENTLAQTDSACCIGKESSSLLIP
NSDQTQKQFDEDGVVSIPPQRYKERQQGFHVDFSVDDINSSFQENTTGLSPYDLDPSCLR
SSRDLSKISLNEYGDSTSYISSTASTSSDRTPSPAHHIGLFSERHKKKAGQNALKFIRQY
PFAHPAIYSLLSGRTLIVLGEDEAIVKKLVTALSIFVPNYGKYAKPVKHWVSSPLHIMDF
QKWKLIGLQRVVSPAGVNTLHSLNRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQI
KRGSTYYMHVQSVLTQLCSKAFLYAFCHHLHLPINEKETEQSVVGRQVNFLKLHLGLVNE
DVKVVQYLAELLKLQYIQEPVRPNHSLLRFDYVPSFLYKI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggcctttaccaaagaggaagaatacgaggaagaaccc
tacaatgagccggccctgccagaggagtactccgtgcccctgttcccctttgcaaaccag
ggaaccaacccgtggtctaagctgtcgggggccaaattttctcgggatttcattctcatc
tcggagttctctgagcaggtgggaccccagcccttgctgaccatccctgatgataccaaa
gtttttggaacttttgatctcaattacttctctctccggatcatgtctgtggattaccag
gcctcctttgtggggcatccatctggctgtgcctaccccaagctgaactttgtggaagac
tccaaggttgttctcggggattcaaaggaaggagcctttgcttatgtgcaccatctcacc
ctttatgatctggaggcccggggttttgtgaggccattttgcatggcctatatttctact
gatgaacataaaatcatgcaacagttccaagagctctcagctgaattttccaaggcttca
gagtgcttgaagaaaggcaatagaaaagcttttgcaaatgaacttgaaaagaaactgaaa
gatctggattacactaggactgtgctgcacactgaaacagagatccagaaaaaagccagt
gacaaatggttttactcctctcaggccattgaaaaggccaatgaattggccagtgtggaa
aaatccattattgaacaccaagacctattaaagcaaatcagatcttatcctcaccgaaaa
ctgaaggcatcagactgctatccctgtgagccagagtgtgcccaggatcaatcagctgac
caggcatccactacctctaaccctgatgagcctgctgaaagaaatctttataggcgaaga
acctcatatacccccaaactcatcaaggcaaagtctgctaaatgttttgacaagaagctg
aaaaccttggaagaactttgtgacactgagtttttcacccagacactggctcagttgaat
cacattgaacatatgtttagaggagatctatgctaccttttgaccagccagattgacaga
gcccttttgaaacaacagtgtataactaacttcctctttgaagacttggtgattttagat
gataaagtagtagagaaacaggataatacacccatggagtacagtcaggacaagctgcac
tccagatctttggaagactgtccaattcctaaagtgttaattaatgtgggatctttcaag
tccagtgtggagtctgtacttatcaagatggagcaggaagttggagatgaattcaaagag
tctgaggtgacagaatctagcatttatgatcatcaggagaacttggattaccttgacatg
gatatgaaaggaagcatcagtagtggtgaaagcattgaagttttgggcactgaaaagtct
gcttctgttctatctaagtcagacagtcaggcaagcttgactgtcccattgagccctcag
gtggtccggagcaaagcagtcagccgaagaactatcagtgaggacagtattgaggttctt
agcacttgtccctcagaggctttgatccctgatgactttaaggcaagttacccaagtgcc
attaatgaagaaccttatgtggaagagccttatgcagatgatgatgaaggagctattcac
tttagtgcaagtgtcagccaacaggatcttggtgagacagagggcagttcagaaaacact
ttagcacaaacagattctgcttgttgtattggaaaggagagttcaagtctcctcatacca
aattctgaccaaacacaaaagcagttcgatgaagatggagtggtcagtattcctccgcag
cgttacaaggagaggcagcaaggatttcatgtggatttctcagtggatgatatcaactct
tctttccaggagaacacaacaggtctttctccttatgacctggacccaagctgcctgaga
agcagcagggatctcagtaagatcagccttaatgaatatggagactccaccagctacata
agcagtacagcatccaccagttcggataggactccttctcctgcccatcacattggcctc
ttctcagagaggcataaaaaaaaggctgggcagaatgccttaaaattcattaggcagtac
ccctttgcacaccctgcaatttattctctgcttagtgggagaactcttattgtcctgggg
gaagatgaagcaatagtgaagaagctcgtaacagctctctccatctttgttcccaactat
ggcaaatatgccaagcctgtgaaacactgggtctcttcccctttgcacataatggatttt
cagaagtggaaacttattggcttacagagagtggtttctccagctggtgtcaacaccctc
cattccctgaaccgatacagccgttacactagcatactagatttggacaacaaaacattg
cggtgcccactctaccgaggcactttggtgccccgcctggcagatcatcgaacacagatc
aaacgggggagcacctactacatgcatgtgcagagcgtcctgacccaactatgctctaag
gcctttctctatgctttctgtcatcacctacacttacccatcaacgagaaggagacagaa
cagtctgtggtaggccgacaggtgaacttcttgaagctgcacctgggcctggtgaatgag
gatgtcaaagtggtgcaatatttggctgagctgctcaagctgcaatacatccaagagcct
gtcaggcctaatcactcactgctcaggtttgactatgttcccagctttttgtacaaaatc
tag
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integrated database retrieval system
